RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 TMEM267Q0VDI3 215 aaPredicted RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 MEP1BQ16820 701 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 PLXDC2Q6UX71 529 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 TMEM108Q6UXF1 575 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 SLC25A42Q86VD7 318 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 MOB3AQ96BX8 217 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 SOSTQ9BQB4 213 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HINT2Q9BX68 163 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 PLA2G12AQ9BZM1 189 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 RAB9BQ9NP90 201 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 SLC52A3Q9NQ40 469 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF331Q9NQX6 463 aaPredicted RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 CHTOPQ9Y3Y2 248 aaKnown RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 NRXN2Q9P2S2 1712 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 A0A1W2PPE3 182 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 A6NDN8 102 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 CD300LBA8K4G0 201 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 TRAPPC2LH3BP13 241 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ACTL6BO94805 426 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HAND1O96004 215 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 CD8AP01732 235 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 SOD3P08294 240 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 FGF5P12034 268 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ALOX5APP20292 161 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 EPHA8P29322 1005 aaPredicted RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 RPL27P61353 136 aaKnown RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 TRA2AQ13595 282 aaKnown RBP eCLIP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 DHRS13Q6UX07 377 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 C12orf54Q6X4T0 127 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 NUFIP2Q7Z417 695 aaKnown RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 LINC01555Q8NAE3 123 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 KCNG3Q8TAE7 436 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF681Q96N22 645 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BKO60814 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BJP06899 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 NPSP0C0P6 89 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 PGA3P0DJD8 388 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF728P0DKX0 622 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BOP23527 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 CTSSP25774 331 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BBP33778 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 GLIPR1P48060 266 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BDP58876 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BCP62807 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 KIAA0040Q15053 153 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST2H2BEQ16778 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 PRR18Q8N4B5 295 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ST8SIA1Q92185 356 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BHQ93079 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 ATP5SQ99766 215 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BNQ99877 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BMQ99879 126 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 WDR13Q9H1Z4 485 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 PLEKHA3Q9HB20 300 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 COLQQ9Y215 455 aaPredicted RBP7.58□□□□□ -1.2
PBRM1-209ENST00000412587 NTNG1Q9Y2I2 539 aa7.58□□□□□ -1.2
PBRM1-209ENST00000412587 C4orf47A7E2U8 309 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 CTSVO60911 334 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 AADACP22760 399 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 KIR2DL1P43626 348 aaPredicted RBP7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ELOBQ15370 118 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF774Q6NX45 483 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ABHD6Q9BV23 337 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 EMC6Q9BV81 110 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 TMEM59Q9BXS4 323 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 KCNIP2Q9NS61 270 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SPAG17Q6Q759 2223 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ASXL3Q9C0F0 2248 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 TPRP12270 2363 aaKnown RBP7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SBF2Q86WG5 1849 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 FIGNL2A6NMB9 653 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SERPINE2P07093 398 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 EFNA3P52797 238 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 PRRX1P54821 245 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 MTCP1P56278 107 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF684Q5T5D7 378 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H2BLQ99880 126 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SMOC1Q9H4F8 434 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF286AQ9HBT8 521 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 KIAA1456Q9P272 454 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 PRSS50Q9UI38 385 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SF3B6Q9Y3B4 125 aaKnown RBP7.57□□□□□ -1.2
PBRM1-209ENST00000412587 FAM186AA6NE01 2351 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 IGHV5-51A0A0C4DH38 117 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SLC22A20A6NK97 555 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 CTAG2O75638 210 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 GNB3P16520 340 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 LSM6P62312 80 aaKnown RBP7.57□□□□□ -1.2
PBRM1-209ENST00000412587 EIF3IQ13347 325 aaKnown RBP7.57□□□□□ -1.2
PBRM1-209ENST00000412587 SLC22A24Q8N4F4 322 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 GJC3Q8NFK1 279 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 OR1N1Q8NGS0 311 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 EDARADDQ8WWZ3 215 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 HSPB9Q9BQS6 159 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 GLRX2Q9NS18 164 aa7.57□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF107Q9UII5 783 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms