RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ITPR1Q14643 2758 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 LOC400499M0QZD8 3231 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 TRAV14DV4A0A0A6YYC5 116 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 FCGR3AP08637 254 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PSMB6P28072 239 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 NPY4RP50391 375 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 UCP3P55916 312 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 FGF12P61328 243 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 SIGIRRQ6IA17 410 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 C17orf107Q6ZR85 190 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF573Q86YE8 665 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 C1orf174Q8IYL3 243 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 FBXL14Q8N1E6 418 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 OR10AD1Q8NGE0 317 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PHYHIPLQ96FC7 376 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 WDR89Q96FK6 387 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 RTBDNQ9BSG5 229 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PKIBQ9C010 78 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 AK3Q9UIJ7 227 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 DNAJC13O75165 2243 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 TRBV6-7A0A0A0MS04 114 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 IGKV1-12A0A0C4DH73 117 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 KANTRA0A1W2PQU2 76 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 CD300LBA8K4G0 201 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 NKX2-8O15522 239 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 IL18BPO95998 194 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 IGKV1D-12P01611 117 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 SELEP16581 610 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 CCNOP22674 350 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 CCL11P51671 97 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 ATP1A1-AS1Q5TC04 95 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 CLEC18BQ6UXF7 455 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 FAM214BQ7L5A3 538 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 WNT2BQ93097 391 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 FAAP24Q9BTP7 215 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 KCNIP3Q9Y2W7 256 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF407Q9C0G0 2248 aa11.69□□□□□ -0.54
LIMS1-205ENST00000410093 RPS10-NUDT3A0A1W2PQS6 291 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 C5orf51A6NDU8 294 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 TRAPPC2LH3BP13 241 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 GEMIN2O14893 280 aaKnown RBP11.68□□□□□ -0.54
LIMS1-205ENST00000410093 IFNA2P01563 188 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 CRHP06850 196 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 CTXN2P0C2S0 81 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 PGAM2P15259 253 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 GLP1RP43220 463 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
LIMS1-205ENST00000410093 GNG3P63215 75 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 SRSF6Q13247 344 aaKnown RBP11.68□□□□□ -0.54
LIMS1-205ENST00000410093 IL13RA2Q14627 380 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF660Q6AZW8 331 aaPredicted RBP11.68□□□□□ -0.54
LIMS1-205ENST00000410093 FBXW12Q6X9E4 464 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 SLC25A26Q70HW3 274 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 SLC30A7Q8NEW0 376 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 CASTOR1Q8WTX7 329 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 TMEM230Q96A57 120 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 SYT3Q9BQG1 590 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 TMEM165Q9HC07 324 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 CHMP1AQ9HD42 196 aaPredicted RBP11.68□□□□□ -0.54
LIMS1-205ENST00000410093 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 PRSS50Q9UI38 385 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 FREM1Q5H8C1 2179 aa11.68□□□□□ -0.54
LIMS1-205ENST00000410093 LEUTXA8MZ59 168 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 PRB1P04280 392 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 SFTPBP07988 381 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 RRASP10301 218 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 SFTPCP11686 197 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 LYL1P12980 280 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-205ENST00000410093 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
LIMS1-205ENST00000410093 IL24Q13007 206 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 GUSBP1Q15486 140 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 C6orf183Q5T699 404 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 C1QTNF12Q5T7M4 302 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 C9orf135Q5VTT2 229 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 IGFL3Q6UXB1 125 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 TFAP2EQ6VUC0 442 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 Q6ZT83 130 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 KCTD9Q7L273 389 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 Q8IYB0 196 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 FAM185AQ8N0U4 392 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 LRRC20Q8TCA0 184 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 OR5P3Q8WZ94 311 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 SULT4A1Q9BR01 284 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms