RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 HTR3BO95264 441 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MT-ND4P03905 459 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CA6P23280 308 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 PMELP40967 661 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NKX2-5P52952 324 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 RAG2P55895 527 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 RBM11P57052 281 aaKnown RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 SPCS3P61009 180 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 BTG1P62324 171 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF718Q3SXZ3 478 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 SAPCD1Q5SSQ6 148 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 PLET1Q6UQ28 207 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 SLC25A26Q70HW3 274 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MKXQ8IYA7 352 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NUP37Q8NFH4 326 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 OR4D10Q8NGI6 311 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ARHGAP5-AS1Q96IT6 56 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 HIST1H2AAQ96QV6 131 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ADAT1Q9BUB4 502 aaKnown RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TLNRD1Q9H1K6 362 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ZMAT3Q9HA38 289 aaKnown RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NUDT15Q9NV35 164 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NUBP2Q9Y5Y2 271 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 PRR14LQ5THK1 2151 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 IGLV3-9A0A075B6K5 115 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 SERPINE3A8MV23 424 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 J3QT63 122 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MLNRO43193 412 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 PLATP00750 562 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CRYAAP02489 173 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CSTBP04080 98 aaKnown RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TCRBP04435 133 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ACAA1P09110 424 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 AKAIN1P0CW23 69 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CD40P25942 277 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 GIFP27352 417 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CHATP28329 748 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 GLRXP35754 106 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 HTR2BP41595 481 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MECP2P51608 486 aaKnown RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TAS2R19P59542 299 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 FGF12P61328 243 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ADORA2A-AS1P86434 159 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MSMPQ1L6U9 139 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 Q6ZR03 302 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TRAPPC6BQ86SZ2 158 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CHST4Q8NCG5 386 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 OR4C16Q8NGL9 310 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MARC2Q969Z3 335 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MICU1Q9BPX6 476 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 OCSTAMPQ9BR26 566 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 UFSP2Q9NUQ7 469 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NKIRAS2Q9NYR9 191 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MTCH1Q9NZJ7 389 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 GAB2Q9UQC2 676 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ARID1AO14497 2285 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 MEIS3P1A6NDR6 274 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 SYNGR1O43759 233 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 IGHV3-13P01766 116 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 BCL3P20749 454 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 BLVRBP30043 206 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CHRNB4P30926 498 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 FAUP35544 74 aaKnown RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NPBWR2P48146 333 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 AGAP6Q5VW22 663 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 RGS7BPQ6MZT1 257 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 LINC00596Q86U02 117 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TMEM171Q8WVE6 324 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 NUDCD2Q8WVJ2 157 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 SLAMF9Q96A28 289 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CYYR1Q96J86 154 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 CACNG6Q9BXT2 260 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ELL3Q9HB65 397 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-202ENST00000409854 IFT46Q9NQC8 304 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TMEM100Q9NV29 134 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 OSGIN2Q9Y236 505 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 ZZEF1O43149 2961 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 PIEZO2Q9H5I5 2752 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CCL21O00585 134 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CCNKO75909 580 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CD3DP04234 171 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF735P0CB33 412 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TBPP20226 339 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 PTAFRP25105 342 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 GCH1P30793 250 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 RAB13P51153 203 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CCR6P51684 374 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ERVK11-1P61568 191 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 RPS23P62266 143 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 MPV17LQ2QL34 196 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 PIGYQ3MUY2 71 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 STEAP1BQ6NZ63 245 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 FBXL14Q8N1E6 418 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 OR10AD1Q8NGE0 317 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 OR8S1Q8NH09 359 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 RADILQ96JH8 1075 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 C12orf57Q99622 126 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 SLC2A8Q9NY64 477 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 RCC2Q9P258 522 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF221Q9UK13 617 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms