RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 NKAIN3Q8N8D7 197 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 ASCC1Q8N9N2 400 aaKnown RBP9.02□□□□□ -0.97
CHMP3-205ENST00000409810 OR52N4Q8NGI2 321 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 OR51A2Q8NGJ7 313 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 OR5D13Q8NGL4 314 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 PPP1R35Q8TAP8 253 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 TNFAIP8L1Q8WVP5 186 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 SGCDQ92629 289 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 WDFY2Q96P53 400 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 DERL3Q96Q80 235 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 PCGF1Q9BSM1 259 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 YTHDF1Q9BYJ9 559 aaKnown RBP9.02□□□□□ -0.97
CHMP3-205ENST00000409810 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 SEBOXQ9HB31 216 aaPredicted RBP9.02□□□□□ -0.97
CHMP3-205ENST00000409810 ONECUT1Q9UBC0 465 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 MXRA5Q9NR99 2828 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 TRBV5-7A0A0A0MS05 114 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 A0A0A6YYJ9 748 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 F8VVB4 439 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 F8VWA3 439 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 GABRPO00591 440 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 SH2D1BO14796 132 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 FCN3O75636 299 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 FSHBP01225 129 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 TFF1P04155 84 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 TK1P04183 234 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 IGFBP3P17936 291 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 PSMA1P25786 263 aaKnown RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 TGFBR2P37173 567 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 NPBWR2P48146 333 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 BPIFB3P59826 476 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 DOC2BQ14184 412 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF146Q15072 292 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 PDCD1Q15116 288 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 ASPHD2Q6ICH7 369 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 GDPD3Q7L5L3 318 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 FAM185AQ8N0U4 392 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 FGFRL1Q8N441 504 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 LY6G5BQ8NDX9 201 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 SNX22Q96L94 193 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 JMJD8Q96S16 334 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 TMED9Q9BVK6 235 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 SUCNR1Q9BXA5 334 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 MS4A7Q9GZW8 240 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 ELL3Q9HB65 397 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 HMG20AQ9NP66 347 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 EXOSC4Q9NPD3 245 aaKnown RBP9.01□□□□□ -0.97
CHMP3-205ENST00000409810 PCDHB16Q9NRJ7 776 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 GSTK1Q9Y2Q3 226 aa9.01□□□□□ -0.97
CHMP3-205ENST00000409810 IGKV1-12A0A0C4DH73 117 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 hCG_1809904A0A1W2PP81 198 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 A0A1W2PPE2 198 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 A0A1W2PR64 198 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 A0A1W2PRV1 198 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 MEGF11A6BM72 1044 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 K7N7A8 449 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 M0R1W7 72 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF780AO75290 641 aaPredicted RBP9□□□□□ -0.97
CHMP3-205ENST00000409810 IGKV1D-12P01611 117 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 CSTBP04080 98 aaKnown RBP9□□□□□ -0.97
CHMP3-205ENST00000409810 SFTPBP07988 381 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 CPEP16870 476 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 GABRR1P24046 479 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 PTGFRP43088 359 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 SNU13P55769 128 aaKnown RBP9□□□□□ -0.97
CHMP3-205ENST00000409810 ARF6P62330 175 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 RPL31P62899 125 aaKnown RBP9□□□□□ -0.97
CHMP3-205ENST00000409810 TPBGQ13641 420 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 RSU1Q15404 277 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 ACSM3Q53FZ2 586 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 KIAA2026Q5HYC2 2103 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 LIPKQ5VXJ0 399 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 ELP2Q6IA86 826 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 RBMS3Q6XE24 437 aaKnown RBP9□□□□□ -0.97
CHMP3-205ENST00000409810 CDH26Q8IXH8 852 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 OR8H2Q8N162 312 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 CHST4Q8NCG5 386 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 MGLLQ99685 303 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 SIRPDQ9H106 197 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 SLITRK2Q9H156 845 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 METTL9Q9H1A3 318 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 TCF7L1Q9HCS4 588 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 NOX4Q9NPH5 578 aa9□□□□□ -0.97
CHMP3-205ENST00000409810 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 A0A1W2PPK0 400 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 FUOMA2VDF0 154 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF737O75373 536 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 MAS1P04201 325 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 IGHV4-38-2P0DP08 117 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 MMP9P14780 707 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF44P15621 663 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 MAP2K4P45985 399 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 OR3A4PP47883 348 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 EDDM3BP56851 147 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 GPR176Q14439 515 aa8.99□□□□□ -0.97
CHMP3-205ENST00000409810 IL13RA2Q14627 380 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms