RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 LOC389332A0A1B0GUA5 103 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 FAM240AA0A1B0GVK7 77 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 SUPT3HB4E1H0 165 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 ZNF701M0R085 212 aaPredicted RBP1.21□□□□□ -2.22
PMS1-203ENST00000409593 CASQ2O14958 399 aaPredicted RBP1.21□□□□□ -2.22
PMS1-203ENST00000409593 HLA-AP01891 365 aaKnown RBP1.21□□□□□ -2.22
PMS1-203ENST00000409593 KLK1P06870 262 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 CGB3P0DN86 165 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 CGB7P0DN87 165 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 CALRP27797 417 aaKnown RBP1.21□□□□□ -2.22
PMS1-203ENST00000409593 ZNF140P52738 457 aaPredicted RBP1.21□□□□□ -2.22
PMS1-203ENST00000409593 MLF1P58340 268 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 ZNF404Q494X3 552 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 EPGNQ6UW88 154 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 MFSD8Q8NHS3 518 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 OR2M4Q96R27 311 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 TSGA10Q9BZW7 698 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 KIR3DX1Q9H7L2 352 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 ZMAT5Q9UDW3 170 aaKnown RBP1.21□□□□□ -2.22
PMS1-203ENST00000409593 RABL2BQ9UNT1 228 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 MPDZO75970 2070 aa1.21□□□□□ -2.22
PMS1-203ENST00000409593 SERTM2A0A1B0GWG4 89 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 CTLA4P16410 223 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 TNXAQ16473 311 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 ATP6AP1LQ52LC2 224 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 OR2V1Q8NHB1 315 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 PYURFQ96I23 114 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 QKIQ96PU8 341 aaKnown RBP eCLIP1.2□□□□□ -2.227e-8■■■■□ 22.9
PMS1-203ENST00000409593 TXNDC17Q9BRA2 123 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 SDHAF3Q9NRP4 125 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 TFR2Q9UP52 801 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 SLC7A11Q9UPY5 501 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 CENPXA8MT69 81 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 ZNF99A8MXY4 864 aaPredicted RBP1.2□□□□□ -2.22
PMS1-203ENST00000409593 OPN1SWP03999 348 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 PSMD4P55036 377 aaKnown RBP1.2□□□□□ -2.22
PMS1-203ENST00000409593 LCN2P80188 198 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 IDNKQ5T6J7 187 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 PROKR2Q8NFJ6 384 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 OR5C1Q8NGR4 320 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 OR6K6Q8NGW6 343 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 NDNFQ8TB73 568 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 TTTY12Q9BZ98 90 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 COA1Q9GZY4 146 aa1.2□□□□□ -2.22
PMS1-203ENST00000409593 C8orf33Q9H7E9 229 aaPredicted RBP1.2□□□□□ -2.22
PMS1-203ENST00000409593 A0A0J9YYE9 177 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 TCAPO15273 167 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 TRBC1P01850 177 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 GALP22466 123 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 HTR2CP28335 458 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 PLCXD3Q63HM9 321 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 OR2W3Q7Z3T1 314 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 GPX8Q8TED1 209 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 CERS2Q96G23 380 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 TSNAXQ99598 290 aaKnown RBP1.19□□□□□ -2.22
PMS1-203ENST00000409593 DDIT4Q9NX09 232 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 CFL2Q9Y281 166 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 HSPE1-MOB4S4R3N1 261 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 SBNO1A3KN83 1393 aa1.19□□□□□ -2.22
PMS1-203ENST00000409593 F5H5T6 163 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 H7C2Y5 167 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 TP53I11O14683 189 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 S1PR2O95136 353 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 RLN2P04090 185 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 OR5AL1P0C617 328 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 SCGB1C2P0DMR2 95 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 ANXA8P13928 327 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 S100A2P29034 98 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 COILP38432 576 aaPredicted RBP1.18□□□□□ -2.22
PMS1-203ENST00000409593 FAM27D1Q5T7N8 215 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 ANXA8L1Q5VT79 327 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 Q6ZSA8 131 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 OTUD6AQ7L8S5 288 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 SETD3Q86TU7 594 aaPredicted RBP1.18□□□□□ -2.22
PMS1-203ENST00000409593 SCGB1C1Q8TD33 95 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 ANAPC13Q9BS18 74 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 SHCBP1LQ9BZQ2 653 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 IQCGQ9H095 443 aaKnown RBP1.18□□□□□ -2.22
PMS1-203ENST00000409593 SLC38A1Q9H2H9 487 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 NSD2O96028 1365 aa1.18□□□□□ -2.22
PMS1-203ENST00000409593 OTOFQ9HC10 1997 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 GYG2O15488 501 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 POP7O75817 140 aaKnown RBP1.17□□□□□ -2.22
PMS1-203ENST00000409593 TAC1P20366 129 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 SLC35B1P78383 322 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 TOMM34Q15785 309 aaPredicted RBP1.17□□□□□ -2.22
PMS1-203ENST00000409593 RAB11BQ15907 218 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 TMEM176BQ3YBM2 270 aaPredicted RBP1.17□□□□□ -2.22
PMS1-203ENST00000409593 PYCR3Q53H96 274 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 CLEC2AQ6UVW9 174 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 UGT2A3Q6UWM9 527 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 MRPL21Q7Z2W9 205 aaKnown RBP1.17□□□□□ -2.22
PMS1-203ENST00000409593 OR6K3Q8NGY3 331 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 TCP10LQ8TDR4 215 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 GLYATL2Q8WU03 294 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 RILPQ96NA2 401 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 ZNF436Q9C0F3 470 aaPredicted RBP1.17□□□□□ -2.22
PMS1-203ENST00000409593 GBF1Q92538 1859 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 GPR98Q8WXG9 6306 aa1.17□□□□□ -2.22
PMS1-203ENST00000409593 MED13Q9UHV7 2174 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms