RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 DPY19L2P2Q6ZN68 376 aa6.47□□□□□ -1.37
SCN9A-202ENST00000409435 LHX4Q969G2 390 aa6.47□□□□□ -1.37
SCN9A-202ENST00000409435 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
SCN9A-202ENST00000409435 OR52D1Q9H346 318 aa6.47□□□□□ -1.37
SCN9A-202ENST00000409435 POFUT1Q9H488 388 aa6.47□□□□□ -1.37
SCN9A-202ENST00000409435 APC2O95996 2303 aa6.47□□□□□ -1.37
SCN9A-202ENST00000409435 KIF13BQ9NQT8 1826 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 TCRBV16S1A1N1A0A5B0 115 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 TMEM210A6NLX4 147 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 TMPRSS2O15393 492 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 AKR7A2O43488 359 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 CLEC2LP0C7M8 214 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 ZFP36L1Q07352 338 aaKnown RBP6.46□□□□□ -1.37
SCN9A-202ENST00000409435 HLXQ14774 488 aaPredicted RBP6.46□□□□□ -1.37
SCN9A-202ENST00000409435 SLC22A6Q4U2R8 563 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 CPOQ8IVL8 374 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 SEC11CQ9BY50 192 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 CXorf36Q9H7Y0 433 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 RNF7Q9UBF6 113 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 IL19Q9UHD0 177 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 NAT8BQ9UHF3 227 aa6.46□□□□□ -1.37
SCN9A-202ENST00000409435 MEIKINA0A087WXM9 373 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SIRPB1O00241 398 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF354AO60765 605 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 F2RP25116 425 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 NPY1RP25929 384 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 DUSP1P28562 367 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 ARRB2P32121 409 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PSMB10P40306 273 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SHBQ15464 509 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 NOXO1Q8NFA2 376 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 UTP4Q969X6 686 aaKnown RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SF3B5Q9BWJ5 86 aaKnown RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 NTN3O00634 580 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 RECKO95980 971 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 T-ENOLP0DO92 83 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 VDAC1P21796 283 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SUB1P53999 127 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SELENOWP63302 87 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 ACKR1Q16570 336 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SPRED3Q2MJR0 410 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF385BQ569K4 471 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 ELFN2Q5R3F8 820 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 GLYATL3Q5SZD4 288 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 LCN15Q6UWW0 184 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 WDR88Q6ZMY6 472 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 C17orf78Q8N4C9 275 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 BMPERQ8N8U9 685 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 OR4S1Q8NGB4 309 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 LRRC29Q8WV35 223 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 RAB37Q96AX2 223 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 VWCEQ96DN2 955 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 RIMS4Q9H426 269 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PPIAL4EA0A075B759 164 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PPIAL4DF5H284 164 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 CD14P08571 375 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PPIAL4FP0DN26 164 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 CD1BP29016 333 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 MDH2P40926 338 aaKnown RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 OR2G6Q5TZ20 316 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 SLC25A28Q96A46 364 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 NEURL3Q96EH8 262 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 TRAF4Q9BUZ4 470 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PPIAL4AQ9Y536 164 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 GPR45Q9Y5Y3 372 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 C3orf80F5H4A9 247 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PHF1O43189 567 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-202ENST00000409435 AKR1C3P42330 323 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 GPR12P47775 334 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 KCNJ3P48549 501 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 TPBGQ13641 420 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 PGGHGQ32M88 737 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF600Q6ZNG1 722 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 FAM24BQ8N5W8 94 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 OR4C13Q8NGP0 309 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 C4orf36Q96KX1 117 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 GSTO2Q9H4Y5 243 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 MED29Q9NX70 200 aa6.46□□□□□ -1.38
SCN9A-202ENST00000409435 LOXHD1Q8IVV2 1947 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 A0A1B0GV90 55 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 A6NJY4 79 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 ARNTLO00327 626 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 ISLRO14498 428 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 SCG5P05408 212 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 FBP1P09467 338 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 HIST1H1CP16403 213 aaKnown RBP6.45□□□□□ -1.38
SCN9A-202ENST00000409435 FCGR2CP31995 323 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 CDKN1AP38936 164 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 OR3A4PP47883 348 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 CCDC144NLQ6NUI1 221 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 SFXN4Q6P4A7 337 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 ZNF322Q6U7Q0 402 aaPredicted RBP6.45□□□□□ -1.38
SCN9A-202ENST00000409435 UBALD1Q8TB05 177 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 COPS9Q8WXC6 57 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 TNFRSF13CQ96RJ3 184 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 C7orf69Q9H7B7 122 aa6.45□□□□□ -1.38
SCN9A-202ENST00000409435 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms