RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 STUMQ69YW2 141 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 MUC20Q8N307 709 aaPredicted RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 C10orf105Q8TEF2 133 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 Q96M66 194 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 CMTM3Q96MX0 182 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 TM2D1Q9BX74 207 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 KCNK15Q9H427 330 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 IFT22Q9H7X7 185 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 RAB22AQ9UL26 194 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 WIPI2Q9Y4P8 454 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 OR2AT4A6NND4 320 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 CD80P33681 288 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 TMEM155Q4W5P6 130 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 FAM201AQ5SY85 155 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 OR10K2Q6IF99 312 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 LRRC28Q86X40 367 aaPredicted RBP17.14■□□□□ 0.33
VSX1-203ENST00000409285 FAM168AQ92567 244 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 FAM46BQ96A09 425 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 PTTG2Q9NZH5 202 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 DNAJB11Q9UBS4 358 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 ZNF222Q9UK12 451 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 ST3GAL6Q9Y274 331 aa17.14■□□□□ 0.33
VSX1-203ENST00000409285 YLPM1P49750 1951 aaKnown RBP17.14■□□□□ 0.33
VSX1-203ENST00000409285 VWC2LB2RUY7 222 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 C3orf80F5H4A9 247 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 PPIHO43447 177 aaKnown RBP17.13■□□□□ 0.33
VSX1-203ENST00000409285 NDUFA2O43678 99 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 CPT2P23786 658 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 GPR6P46095 362 aaPredicted RBP17.13■□□□□ 0.33
VSX1-203ENST00000409285 MPV17LQ2QL34 196 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 ATPAF1Q5TC12 328 aaPredicted RBP17.13■□□□□ 0.33
VSX1-203ENST00000409285 MZT2AQ6P582 158 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 BATF2Q8N1L9 274 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 FAM89BQ8N5H3 189 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 BOLLQ8N9W6 283 aaKnown RBP17.13■□□□□ 0.33
VSX1-203ENST00000409285 ANGPTL6Q8NI99 470 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 FOXC2Q99958 501 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 URM1Q9BTM9 101 aaKnown RBP17.13■□□□□ 0.33
VSX1-203ENST00000409285 LPAR5Q9H1C0 372 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 BANF2Q9H503 90 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 TMEM165Q9HC07 324 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 IL36RNQ9UBH0 155 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 ITPR3Q14573 2671 aa17.13■□□□□ 0.33
VSX1-203ENST00000409285 IGKV1D-17A0A075B6S4 117 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 TNFRSF13BO14836 293 aaPredicted RBP17.12■□□□□ 0.33
VSX1-203ENST00000409285 MPIG6BO95866 241 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 PSG2P11465 335 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 PIGYQ3MUY2 71 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 SFRP4Q6FHJ7 346 aaPredicted RBP17.12■□□□□ 0.33
VSX1-203ENST00000409285 DCDC5Q6ZRR9 648 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 OR5H6Q8NGV6 325 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 SLC25A38Q96DW6 304 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 SEH1LQ96EE3 360 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 PIMREGQ9BSJ6 248 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 SELENOIQ9C0D9 397 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 RHBDL2Q9NX52 303 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 GMFBP60983 142 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 UBE2NLQ5JXB2 153 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 CHST4Q8NCG5 386 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 ABCG5Q9H222 651 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 MMP27Q9H306 513 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 KAAG1Q9UBP8 84 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 GLS2Q9UI32 602 aa17.12■□□□□ 0.33
VSX1-203ENST00000409285 IGHV3OR15-7A0A075B7D8 119 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 H3BUI4 141 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 GEMIN2O14893 280 aaKnown RBP17.11■□□□□ 0.33
VSX1-203ENST00000409285 SCGNO76038 276 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 ZNF205O95201 554 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 APOA1P02647 267 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 LMO1P25800 156 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 EFNB2P52799 333 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 PLA2G7Q13093 441 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 CARTPTQ16568 116 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 ZNF788Q6ZQV5 615 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 KRTAP1-3Q8IUG1 177 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 SPICQ8N5J4 248 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 SAMD12Q8N8I0 201 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 C19orf18Q8NEA5 215 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 MCFD2Q8NI22 146 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 RAB40AQ8WXH6 277 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 SDSLQ96GA7 329 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 NUDT16L1Q9BRJ7 211 aaKnown RBP17.11■□□□□ 0.33
VSX1-203ENST00000409285 TMEM246Q9BRR3 403 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 BPESC1Q9GZL8 116 aa17.11■□□□□ 0.33
VSX1-203ENST00000409285 RCC2Q9P258 522 aaKnown RBP17.11■□□□□ 0.33
VSX1-203ENST00000409285 ABCA2Q9BZC7 2435 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 CR1P17927 2039 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 A0A0A6YYH2 397 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 METTL21EPA6NDL7 271 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 A6NJ64 397 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 RFPL4AA6NLU0 287 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 FOXI3A8MTJ6 420 aaPredicted RBP17.1■□□□□ 0.33
VSX1-203ENST00000409285 RFPL4AL1F8VTS6 287 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 SH2D1BO14796 132 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 HAND1O96004 215 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 ART1P52961 327 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 CLEC12BQ2HXU8 276 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 Q5PR19 223 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 SHEQ5VZ18 495 aa17.1■□□□□ 0.33
VSX1-203ENST00000409285 Q6P435 159 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms