RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NKX3-1Q99801 234 aaPredicted RBP11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 PECRQ9BY49 303 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 OR2H1Q9GZK4 316 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 MFFQ9GZY8 342 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 ARL6Q9H0F7 186 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 BANF2Q9H503 90 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 MED9Q9NWA0 146 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 HSF4Q9ULV5 492 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 FIGNL2A6NMB9 653 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF587BE7ETH6 402 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 ARPC5O15511 151 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 SSX5O60225 188 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 WDR1O75083 606 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 NRASP01111 189 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 PMP2P02689 132 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 SERPINA5P05154 406 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 CXCL2P19875 107 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 SERPINA2P20848 420 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 CALCRP30988 508 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 ARR3P36575 388 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 NUP62P37198 522 aaPredicted RBP11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 PMELP40967 661 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 H2BFSP57053 126 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 HLXQ14774 488 aaPredicted RBP11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 UBE2V2Q15819 145 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 RSPO1Q2MKA7 263 aaPredicted RBP11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 CHRFAM7AQ494W8 412 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF774Q6NX45 483 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 GVQW1Q8N7I0 195 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 TMEM104Q8NE00 496 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 CSNK2A3Q8NEV1 391 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 PXT1Q8NFP0 134 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 NINJ1Q92982 152 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 SPACA5Q96QH8 159 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 VRK1Q99986 396 aaPredicted RBP11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 DHRS9Q9BPW9 319 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 NICN1Q9BSH3 213 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 PPA2Q9H2U2 334 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 PLEKHJ1Q9NW61 149 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 IL36GQ9NZH8 169 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 PFDN2Q9UHV9 154 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 GPR132Q9UNW8 380 aa11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 C14orf166Q9Y224 244 aaKnown RBP11.14□□□□□ -0.63
SMARCB1-203ENST00000407082 ZNF816-ZNF321PA0A0X1KG74 233 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 OR5H14A6NHG9 310 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 KIAA1324LA8MWY0 1029 aaPredicted RBP11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 LEUTXA8MZ59 168 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 SIX6O95475 246 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 MPC2O95563 127 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 HOXD4P09016 255 aaPredicted RBP11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 IGFBP2P18065 325 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 DTYMKP23919 212 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 CHRNB4P30926 498 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 TMEM50BP56557 158 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 PSG4Q00888 419 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 MALLQ13021 153 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 MICBQ29980 383 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 TMEM211Q6ICI0 200 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 OR52W1Q6IF63 320 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 C11orf87Q6NUJ2 197 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 ASCL4Q6XD76 172 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 ZSCAN4Q8NAM6 433 aaPredicted RBP11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 INO80EQ8NBZ0 244 aaPredicted RBP11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 ST8SIA4Q92187 359 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 RND1Q92730 232 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 TRIB1Q96RU8 372 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 NMES1Q9C002 83 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 BCO1Q9HAY6 547 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 GP6Q9HCN6 339 aa11.13□□□□□ -0.63
SMARCB1-203ENST00000407082 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 A0A0A6YYD4 124 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 FOXI3A8MTJ6 420 aaPredicted RBP11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 HTR3BO95264 441 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 PET100P0DJ07 73 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 B4GALT1P15291 398 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 AKR1C4P17516 323 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 VAMP1P23763 118 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 SNU13P55769 128 aaKnown RBP11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 SORDQ00796 357 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 PLP2Q04941 152 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 PPP1R1AQ13522 171 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 NHLRC3Q5JS37 347 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 PLAC9Q5JTB6 97 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 TMEM42Q69YG0 159 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 CLEC9AQ6UXN8 241 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 ACOT7LQ6ZUV0 252 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 PIGTQ969N2 578 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 SPSB4Q96A44 273 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 Q96M66 194 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 SOX7Q9BT81 388 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 C1QTNF5Q9BXJ0 243 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 WNT5BQ9H1J7 359 aa11.12□□□□□ -0.63
SMARCB1-203ENST00000407082 RAB18Q9NP72 206 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms