RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 IFNA4P05014 189 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 ZMYND11Q15326 602 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 CD200R1LQ6Q8B3 271 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 TMEM123Q8N131 208 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 MRGPRDQ8TDS7 321 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 C22orf15Q8WYQ4 148 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 ITPKCQ96DU7 683 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 G6PC2Q9NQR9 355 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 UBQLN2Q9UHD9 624 aa7.89□□□□□ -1.15
LIG4-202ENST00000405925 CDRT15L2A8MXV6 281 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 IGHV3-13P01766 116 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 IGHV3-7P01780 117 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 ISG15P05161 165 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 OR3A1P47881 315 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 GGNQ86UU5 652 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 DTX1Q86Y01 620 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 MRPL41Q8IXM3 137 aaKnown RBP7.88□□□□□ -1.15
LIG4-202ENST00000405925 TMEM104Q8NE00 496 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 OR4A16Q8NH70 328 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 ADAMTS17Q8TE56 1095 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 FYTTD1Q96QD9 318 aaKnown RBP7.88□□□□□ -1.15
LIG4-202ENST00000405925 TMPRSS13Q9BYE2 586 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.88□□□□□ -1.15
LIG4-202ENST00000405925 TRAV39A0A0B4J263 110 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 I3L521 148 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 K7EPK0 472 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 OR4E1P0C645 316 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 FSTP19883 344 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 GNB2P62879 340 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 RPS27AP62979 156 aaKnown RBP7.88□□□□□ -1.15
LIG4-202ENST00000405925 PLAURQ03405 335 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 PRAMEF5Q5TYX0 476 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 CD276Q5ZPR3 534 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 NSUN5P2Q63ZY6 315 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 FAM71E2Q8N5Q1 922 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 RAB1CQ92928 201 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 SNRNP40Q96DI7 357 aaKnown RBP7.88□□□□□ -1.15
LIG4-202ENST00000405925 DDOQ99489 341 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 PECRQ9BY49 303 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 PLXNB3Q9ULL4 1909 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 DEFB108AA8MXU0 73 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 COX5BP10606 129 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 HNF4GQ14541 408 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 OR52B4Q8NGK2 314 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 PRDM14Q9GZV8 571 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 RNF7Q9UBF6 113 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 IGHV3-43A0A0B4J1X8 118 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 TRAV38-1A0A0B4J264 116 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 LRP5LA4QPB2 252 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 IGHV3-43DP0DP04 118 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 GFRA1P56159 465 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 TMEM268Q5VZI3 342 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 ZNF826PQ6ZT77 177 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 SSX8Q7RTT4 187 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 LINC01560Q8TB33 94 aa7.88□□□□□ -1.15
LIG4-202ENST00000405925 KLF14Q8TD94 323 aaPredicted RBP7.88□□□□□ -1.15
LIG4-202ENST00000405925 HEYLQ9NQ87 328 aaPredicted RBP7.88□□□□□ -1.15
LIG4-202ENST00000405925 FER1L5A0AVI2 2057 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 IFNA10P01566 189 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 RPS2P15880 293 aaKnown RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 SPNP16150 400 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 IGHV1-2P23083 117 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 CEACAM21Q3KPI0 293 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 SHEQ5VZ18 495 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 MOB1BQ7L9L4 216 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ZNF486Q96H40 463 aaPredicted RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 PIEZO2Q9H5I5 2752 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 CISD1Q9NZ45 108 aaKnown RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 ZNF629Q9UEG4 869 aaPredicted RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 V9GYH0 126 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 MED13Q9UHV7 2174 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 RFPL4AA6NLU0 287 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 RFPL4AL1F8VTS6 287 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 HAND1O96004 215 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 CECR9P0C854 216 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ADRA2CP18825 462 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ALDH3B1P43353 468 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 FOXG1P55316 489 aaPredicted RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 FAM3AP98173 230 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 SP6Q3SY56 376 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 TIMM23BQ5SRD1 257 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 FDX2Q6P4F2 183 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ZIC4Q8N9L1 334 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 GPX8Q8TED1 209 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 DYRK2Q92630 601 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 OR2V2Q96R30 315 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 SOX7Q9BT81 388 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 RSPO3Q9BXY4 272 aaPredicted RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 PLXND1Q9Y4D7 1925 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 RANBP2P49792 3224 aaKnown RBP7.87□□□□□ -1.15
LIG4-202ENST00000405925 TRBV5-7A0A0A0MS05 114 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ARPC4-TTLL3A0A0A6YYG9 625 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 A0A0A6YYJ9 748 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 A0A1B0GUH1 482 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 B8ZZF3 427 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 S100A1P23297 94 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 ZBTB25P24278 435 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 SERPINF1P36955 418 aa7.87□□□□□ -1.15
LIG4-202ENST00000405925 CAMLGP49069 296 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms