RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZNF738Q8NE65 137 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR8G5Q8NG78 346 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR5M1Q8NGP8 315 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 FXYD5Q96DB9 178 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 YIPF6Q96EC8 236 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 SMIM8Q96KF7 97 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 SPACA5Q96QH8 159 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 C7orf50Q9BRJ6 194 aaKnown RBP2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 TBL1XR1Q9BZK7 514 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 NKIRAS1Q9NYS0 192 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 DHCR7Q9UBM7 475 aaKnown RBP2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 PSMD13Q9UNM6 376 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 PUS1Q9Y606 427 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 ELP1O95163 1332 aa2.13□□□□□ -2.07
HMGB1P17-201ENST00000403495 BRWD3Q6RI45 1802 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 TMEM72A0PK05 275 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 TMEM213A2RRL7 107 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 GOLGA8IPA6NC78 632 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZNF98A6NK75 572 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 CLDN34H7C241 214 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 ITGB1BP1O14713 200 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 NIPSNAP2O75323 286 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 CD5P06127 495 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 HLA-GP17693 338 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 TUFMP49411 452 aaKnown RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 PLTPP55058 493 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 FLOT2Q14254 428 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 TRAM1Q15629 374 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 CDNFQ49AH0 187 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZNF678Q5SXM1 525 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 KPRPQ5T749 579 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 SYT6Q5T7P8 510 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 HBMQ6B0K9 141 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 PRSS54Q6PEW0 395 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 CLEC19AQ6UXS0 136 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 PLEKHG7Q6ZR37 379 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 Q6ZT83 130 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 DAZ4Q86SG3 579 aaKnown RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 MRPL52Q86TS9 123 aaKnown RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 TMEM25Q86YD3 366 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 GAPTQ8N292 157 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 C22orf15Q8WYQ4 148 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR5P2Q8WZ92 322 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 MRPL20Q9BYC9 149 aaKnown RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 SHCBP1LQ9BZQ2 653 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 DAZ1Q9NQZ3 744 aaKnown RBP2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 ANXA10Q9UJ72 324 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 TFR2Q9UP52 801 aa2.12□□□□□ -2.07
HMGB1P17-201ENST00000403495 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 A8MWL6 223 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 PRAMEF26H0Y7S4 382 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 CRXO43186 299 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 AQP9O43315 295 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR7C2O60412 319 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 SNAP29O95721 258 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 RLN2P04090 185 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 PET100P0DJ07 73 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 M6PRP20645 277 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 RPA3P35244 121 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 AQP5P55064 265 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 PRKCDQ05655 676 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 BTN1A1Q13410 526 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 RAB31Q13636 194 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 FAM53BQ14153 422 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 TRIP13Q15645 432 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 TOMM34Q15785 309 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 FBXL19-AS1Q494R0 122 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 ACTBL2Q562R1 376 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 RBM48Q5RL73 367 aaKnown RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 ATP6V1C2Q8NEY4 427 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 OR51Q1Q8NH59 317 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 FAM57AQ8TBR7 257 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 RORBQ92753 470 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 CCDC127Q96BQ5 260 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 MRPL48Q96GC5 212 aaKnown RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZNF649Q9BS31 505 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 DSN1Q9H410 356 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 ASB7Q9H672 318 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 C12orf4Q9NQ89 552 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 NLE1Q9NVX2 485 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 C1orf109Q9NX04 203 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 PRO0628Q9UI54 55 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 KLF13Q9Y2Y9 288 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 SNX24Q9Y343 169 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 ZNF706Q9Y5V0 76 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 COL4A4P53420 1690 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 ABCB11O95342 1321 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 AK9Q5TCS8 1911 aa2.11□□□□□ -2.07
HMGB1P17-201ENST00000403495 RPRD2Q5VT52 1461 aaKnown RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 IGHV3OR16-8A0A075B7F1 116 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 FABP12A6NFH5 140 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 MFNGO00587 321 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 CDIPTO14735 213 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 TCAPO15273 167 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 SHOX2O60902 331 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 MYO1DO94832 1006 aa2.1□□□□□ -2.07
HMGB1P17-201ENST00000403495 IGKV5-2P06315 115 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms