RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ABCA11PQ4W5N1 156 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 TMEM123Q8N131 208 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 LRRC18Q8N456 261 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 TMEM156Q8N614 296 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 RTN4IP1Q8WWV3 396 aaPredicted RBP17.22■□□□□ 0.35
CCDC47-202ENST00000403162 TOMM40LQ969M1 308 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 SPTSSAQ969W0 71 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 C18orf12Q96KH6 178 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 SPSB2Q99619 263 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 GPR173Q9NS66 373 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 C19orf12Q9NSK7 152 aa17.22■□□□□ 0.35
CCDC47-202ENST00000403162 CHCHD2Q9Y6H1 151 aaPredicted RBP17.22■□□□□ 0.35
CCDC47-202ENST00000403162 A0A087WZY1 265 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 ZNF850A8MQ14 1090 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 DHHO43323 396 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 KLK3P07288 261 aaPredicted RBP17.21■□□□□ 0.35
CCDC47-202ENST00000403162 SNRNP70P08621 437 aaKnown RBP17.21■□□□□ 0.35
CCDC47-202ENST00000403162 CD63P08962 238 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 DBHP09172 617 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 CAMLGP49069 296 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 IL13RA2Q14627 380 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 LIAT1Q6ZQX7 453 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 SGK3Q96BR1 496 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 AKIRIN1Q9H9L7 192 aaPredicted RBP17.21■□□□□ 0.35
CCDC47-202ENST00000403162 SPACA1Q9HBV2 294 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 FAM186AA6NE01 2351 aa17.21■□□□□ 0.35
CCDC47-202ENST00000403162 ONECUT2O95948 504 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 CHATP28329 748 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 GLP1RP43220 463 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 RRADP55042 308 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 RSU1Q15404 277 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 SNAI3Q3KNW1 292 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 SP6Q3SY56 376 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 CLEC9AQ6UXN8 241 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 HPSE2Q8WWQ2 592 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 ZNF385AQ96PM9 386 aaKnown RBP17.21■□□□□ 0.34
CCDC47-202ENST00000403162 ZPBPQ9BS86 351 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 ANGPTL4Q9BY76 406 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 DEFB126Q9BYW3 111 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 PLEK2Q9NYT0 353 aa17.21■□□□□ 0.34
CCDC47-202ENST00000403162 METTL1Q9UBP6 276 aaKnown RBP17.21■□□□□ 0.34
CCDC47-202ENST00000403162 C19orf25Q9UFG5 118 aaPredicted RBP17.21■□□□□ 0.34
CCDC47-202ENST00000403162 DMXL1Q9Y485 3027 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 GVINP1Q7Z2Y8 2422 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 EIF1BO60739 113 aaKnown RBP17.2■□□□□ 0.34
CCDC47-202ENST00000403162 VAMP5O95183 116 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 DUSP1P28562 367 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 TAF9Q16594 264 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 LYZL2Q7Z4W2 148 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 MR1Q95460 341 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 IP6K3Q96PC2 410 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 DDA1Q9BW61 102 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 EIF5A2Q9GZV4 153 aaKnown RBP17.2■□□□□ 0.34
CCDC47-202ENST00000403162 SEBOXQ9HB31 216 aaPredicted RBP17.2■□□□□ 0.34
CCDC47-202ENST00000403162 ZDHHC8Q9ULC8 765 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 ARID1AO14497 2285 aa17.2■□□□□ 0.34
CCDC47-202ENST00000403162 TP53I11O14683 189 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 DIRAS3O95661 229 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 S100A9P06702 114 aaKnown RBP17.19■□□□□ 0.34
CCDC47-202ENST00000403162 ACKR3P25106 362 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 OPRM1P35372 400 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 RHEBQ15382 184 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 PRAMEF20Q5VT98 475 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 ASCL4Q6XD76 172 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 NANPQ8TBE9 248 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 ZNF251Q9BRH9 671 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 FOXD3Q9UJU5 478 aaPredicted RBP17.19■□□□□ 0.34
CCDC47-202ENST00000403162 NPIPA2E9PIF3 369 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 NPIPA3F8WFD2 350 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 M0R036 132 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 TERTO14746 1132 aaKnown RBP17.19■□□□□ 0.34
CCDC47-202ENST00000403162 ANGPTL7O43827 346 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 INTS12Q96CB8 462 aaKnown RBP17.19■□□□□ 0.34
CCDC47-202ENST00000403162 MSI2Q96DH6 328 aaKnown RBP17.19■□□□□ 0.34
CCDC47-202ENST00000403162 TCEAL7Q9BRU2 100 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 PBDC1Q9BVG4 233 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 RBM24Q9BX46 236 aaKnown RBP17.19■□□□□ 0.34
CCDC47-202ENST00000403162 SLC2A9Q9NRM0 540 aa17.19■□□□□ 0.34
CCDC47-202ENST00000403162 MED12Q93074 2177 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 A0A1B0GW64 132 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 A0A1W2PPH5 198 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 A6NLC8 198 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 C9orf172C9J069 976 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 LINC01387J3KSC0 135 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 XRCC2O43543 280 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 SPRY1O43609 319 aaPredicted RBP17.18■□□□□ 0.34
CCDC47-202ENST00000403162 RAB5AP20339 215 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 CRYGSP22914 178 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 CHAF1BQ13112 559 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 CNN3Q15417 329 aaKnown RBP17.18■□□□□ 0.34
CCDC47-202ENST00000403162 TMEM164Q5U3C3 297 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 RBMS3Q6XE24 437 aaKnown RBP17.18■□□□□ 0.34
CCDC47-202ENST00000403162 LGI3Q8N145 548 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 FBXO17Q96EF6 278 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 MALSU1Q96EH3 234 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 MARS2Q96GW9 593 aaKnown RBP17.18■□□□□ 0.34
CCDC47-202ENST00000403162 ZNF581Q9P0T4 197 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 NXT1Q9UKK6 140 aaKnown RBP17.18■□□□□ 0.34
CCDC47-202ENST00000403162 EML6Q6ZMW3 1958 aa17.18■□□□□ 0.34
CCDC47-202ENST00000403162 IGKV1-27A0A075B6S5 117 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms