RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 DNPH1O43598 174 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 IFNA2P01563 188 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 CSTBP04080 98 aaKnown RBP13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 FAM27BQ5VT28 67 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 ZIC4Q8N9L1 334 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PIGTQ969N2 578 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SARAFQ96BY9 339 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 CYYR1Q96J86 154 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 OR10C1Q96KK4 312 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 C1orf123Q9NWV4 160 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PLEK2Q9NYT0 353 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PRR13Q9NZ81 148 aa13.79□□□□□ -0.2
CHRFAM7A-203ENST00000401522 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 ABCD4O14678 606 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 TAAR5O14804 337 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 RAB35Q15286 201 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PDSS1Q5T2R2 415 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SVBPQ8N300 66 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SEMA6DQ8NFY4 1073 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 TMED6Q8WW62 240 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 MAFIPQ8WZ33 124 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SPSB1Q96BD6 273 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 WDYHV1Q96HA8 205 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 Q96M66 194 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 TSNAXQ99598 290 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SF3B5Q9BWJ5 86 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 MMP26Q9NRE1 261 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 EDARQ9UNE0 448 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 DNAJC13O75165 2243 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 TNFSF11O14788 317 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SIGLEC5O15389 551 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 TSPAN9O75954 239 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SERPINA5P05154 406 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 RBMXP38159 391 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 RAB32Q13637 225 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 DMRTC1Q5HYR2 192 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PABPC1L2AQ5JQF8 200 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PLXDC2Q6UX71 529 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 BOLLQ8N9W6 283 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 OR2V1Q8NHB1 315 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 FBXO17Q96EF6 278 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 SLC5A7Q9GZV3 580 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 PRDM14Q9GZV8 571 aa13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 ZNF701Q9NV72 531 aaPredicted RBP13.78□□□□□ -0.2
CHRFAM7A-203ENST00000401522 FAM74A7A6NL05 159 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 DBHP09172 617 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FAM157CP0CG43 387 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CRYGSP22914 178 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PTGER4P35408 488 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CARD18P57730 90 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RAC3P60763 192 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FAM74A3Q4VXF1 159 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 EIF5AL1Q6IS14 154 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR10D3Q8NH80 312 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SAT2Q96F10 170 aaPredicted RBP13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 METTL9Q9H1A3 318 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PLEKHJ1Q9NW61 149 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 LPAR3Q9UBY5 353 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PURGQ9UJV8 347 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 MCTS1Q9ULC4 181 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 IGSF10Q6WRI0 2623 aa13.77□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PLATP00750 562 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 HOXB5P09067 269 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TMEM225BP0DP42 221 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SRYQ05066 204 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SNAI3Q3KNW1 292 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 C10orf91Q5T1B1 145 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 C6orf201Q7Z4U5 140 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SGPP2Q8IWX5 399 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GPR137CQ8N3F9 429 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 BHLHE23Q8NDY6 225 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF629Q9UEG4 869 aaPredicted RBP13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 HSF4Q9ULV5 492 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CARHSP1Q9Y2V2 147 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SPTA1P02549 2419 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SGCEO43556 437 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 KNG1P01042 644 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CST2P09228 141 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GABRR1P24046 479 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ARHGDIBP52566 201 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 MTCP1P56278 107 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 S100A10P60903 97 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CNN3Q15417 329 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR51F2Q8NH61 342 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF2Q9BSG1 426 aaPredicted RBP13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PCDHB16Q9NRJ7 776 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GPR173Q9NS66 373 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 DECR2Q9NUI1 292 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GSKIPQ9P0R6 139 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ANXA10Q9UJ72 324 aa13.76□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF705EA8MWA4 302 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SFTPBP07988 381 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 EDN3P14138 238 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 DTYMKP23919 212 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RBM39Q14498 530 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RSU1Q15404 277 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms