RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RGS11O94810 467 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 OR2F2O95006 317 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 ONECUT2O95948 504 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 NGFP01138 241 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 HPNP05981 417 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 PRF1P14222 555 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 NDUFB7P17568 137 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 OR2F1Q13607 317 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 EXOSC2Q13868 293 aaKnown RBP12.2□□□□□ -0.46
SCAF4-202ENST00000399804 SMIM21Q3B7S5 101 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 AKR1C8PQ5T2L2 129 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM123Q8N131 208 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 C2orf50Q96LR7 162 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 LRRC30A6NM36 301 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF724A8MTY0 619 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 BCL3P20749 454 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 NKX2-1P43699 371 aaPredicted RBP12.2□□□□□ -0.46
SCAF4-202ENST00000399804 OR2B11Q5JQS5 317 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 Q8IYB0 196 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 OR5A2Q8NGI9 324 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 EGLN1Q9GZT9 426 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 NUP50Q9UKX7 468 aa12.2□□□□□ -0.46
SCAF4-202ENST00000399804 OTOGLQ3ZCN5 2332 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 CEBPZOSA8MTT3 80 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 MSTNO14793 375 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 IFNA17P01571 189 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 KCNMB1Q16558 191 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 INO80CQ6PI98 192 aaPredicted RBP12.19□□□□□ -0.46
SCAF4-202ENST00000399804 BHLHA15Q7RTS1 189 aaPredicted RBP12.19□□□□□ -0.46
SCAF4-202ENST00000399804 HSD17B11Q8NBQ5 300 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 OR8U1Q8NH10 309 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 A0A0C4DFX4 3053 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 DUS4LO95620 317 aaKnown RBP12.19□□□□□ -0.46
SCAF4-202ENST00000399804 CPN1P15169 458 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 OR10S1Q8NGN2 331 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
SCAF4-202ENST00000399804 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF107Q9UII5 783 aaPredicted RBP12.19□□□□□ -0.46
SCAF4-202ENST00000399804 ADAP1O75689 374 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF708P17019 499 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 C17orf78Q8N4C9 275 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 PLPPR2Q96GM1 343 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 PCDHB10Q9UN67 800 aa12.19□□□□□ -0.46
SCAF4-202ENST00000399804 DMBX1Q8NFW5 382 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 RFESDQ8TAC1 157 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 SCARB1Q8WTV0 552 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF552Q9H707 407 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-202ENST00000399804 MSL2Q9HCI7 577 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 PRR33A8MZF0 331 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 MED6O75586 246 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 ACTL6BO94805 426 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 SFT2D2O95562 160 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 LHX2P50458 406 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 LIMK1P53667 647 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 ZIC4Q8N9L1 334 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 RELL2Q8NC24 303 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF319Q9P2F9 582 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 ERRFI1Q9UJM3 462 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-202ENST00000399804 LIPGQ9Y5X9 500 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 FAM3AP98173 230 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 PEAR1Q5VY43 1037 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-202ENST00000399804 TCTEX1D2Q8WW35 142 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 DHRS9Q9BPW9 319 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 LEUTXA8MZ59 168 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 AHRRA9YTQ3 701 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 VSIG10L2P0DP72 767 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 HNF4GQ14541 408 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 C1QL2Q7Z5L3 287 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 SOSTQ9BQB4 213 aa12.18□□□□□ -0.46
SCAF4-202ENST00000399804 OPN3Q9H1Y3 402 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-202ENST00000399804 MRPS18CQ9Y3D5 142 aaKnown RBP12.18□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF716A6NP11 495 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 CLDN18P56856 261 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 BLOC1S1P78537 153 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 C11orf87Q6NUJ2 197 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-202ENST00000399804 OR1K1Q8NGR3 316 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 CADP27708 2225 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF318Q5VUA4 2279 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 B8ZZF3 427 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 F8W036 122 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 MECP2P51608 486 aaKnown RBP12.17□□□□□ -0.46
SCAF4-202ENST00000399804 SHEQ5VZ18 495 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 TEX261Q6UWH6 196 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 TMED6Q8WW62 240 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 GFI1Q99684 422 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 U3KQ87 197 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM14DPA8MWL7 114 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 MAGT1Q9H0U3 335 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 NDRG3Q9UGV2 375 aa12.17□□□□□ -0.46
SCAF4-202ENST00000399804 TRAV39A0A0B4J263 110 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms