RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 TNRC6CQ9HCJ0 1690 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 ARRDC5A6NEK1 342 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 KIR2DL1P43626 348 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 KIR2DL2P43627 348 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 FABP9Q0Z7S8 132 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 CSRP2Q16527 193 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 LYG2Q86SG7 212 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 MYPOPQ86VE0 399 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 SLC25A32Q9H2D1 315 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 SLC25A37Q9NYZ2 338 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 LOC102724200A0A096LPH7 203 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 GATCO43716 136 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 CD3DP04234 171 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 HIST1H1EP10412 219 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 SELENOPP49908 381 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 FAAP20Q6NZ36 180 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 SMIM7Q9BQ49 75 aa10.67□□□□□ -0.7
CACNA1C-213ENST00000399629 PSMB6P28072 239 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 CD96P40200 585 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 LAMTOR1Q6IAA8 161 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 DERL3Q96Q80 235 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 C12orf10Q9HB07 376 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 CDIPTO14735 213 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 RPS19P39019 145 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 TMEM97Q5BJF2 176 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 C1QL3Q5VWW1 255 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 ZNF683Q8IZ20 524 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 OR13F1Q8NGS4 319 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 C7orf72A4D263 438 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 KIR3DL2P43630 455 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 NAA50Q9GZZ1 169 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 PLEKHB1Q9UF11 243 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 RNF115Q9Y4L5 304 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 SIAH2O43255 324 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 CT62P0C5K7 136 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 PPP1CCP36873 323 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 PDPNQ86YL7 162 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 RXFP4Q8TDU9 374 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 TMPRSS5Q9H3S3 457 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 OR4E1P0C645 316 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 ROM1Q03395 351 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 HLXQ14774 488 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 OR5AP2Q8NGF4 316 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 ARHGAP5-AS1Q96IT6 56 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 UQCC2Q9BRT2 126 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
CACNA1C-213ENST00000399629 C3orf85A0A1B0GTC6 90 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 UMAD1C9J7I0 102 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 GSTZ1O43708 216 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 CCL8P80075 99 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 SLC38A11Q08AI6 406 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 ETV3LQ6ZN32 361 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 ORAI1Q96D31 301 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 RNF2Q99496 336 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 MSL2Q9HCI7 577 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 PIPOXQ9P0Z9 390 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 UGT2A1Q9Y4X1 527 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 IGHV1-45A0A0A0MS14 117 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 A0A1W2PQD3 144 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 PRR33A8MZF0 331 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 AMER3Q8N944 861 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 SRRQ9GZT4 340 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 NPAP1Q9NZP6 1156 aa10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 RAE1P78406 368 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-213ENST00000399629 SS18L1O75177 396 aaPredicted RBP10.65□□□□□ -0.71
CACNA1C-213ENST00000399629 RNF224P0DH78 156 aa10.65□□□□□ -0.71
CACNA1C-213ENST00000399629 PRSS12P56730 875 aa10.65□□□□□ -0.71
CACNA1C-213ENST00000399629 ZNF528Q3MIS6 628 aa10.65□□□□□ -0.71
CACNA1C-213ENST00000399629 WDR38Q5JTN6 314 aa10.65□□□□□ -0.71
CACNA1C-213ENST00000399629 NEURL1O76050 574 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 C6orf201Q7Z4U5 140 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 LRRTM1Q86UE6 522 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 HGDQ93099 445 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 HARBI1Q96MB7 349 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 CFHR5Q9BXR6 569 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 SH2D2AQ9NP31 389 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 PDCD6O75340 191 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 TRAPPC2P0DI81 140 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 TRAPPC2BP0DI82 140 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 DAOP14920 347 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 ZNF714Q96N38 554 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 FBXL17Q9UF56 701 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 PITPNC1Q9UKF7 332 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 LIPT2A6NK58 231 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 CST7O76096 145 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 GIPP09681 153 aaPredicted RBP10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 OR8I2Q8N0Y5 310 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 MPZL1O95297 269 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 C1orf174Q8IYL3 243 aa10.64□□□□□ -0.71
CACNA1C-213ENST00000399629 OR4Q3Q8NH05 313 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms