RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 SNRNP40Q96DI7 357 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 FGF21Q9NSA1 209 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 THYN1Q9P016 225 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 LGALS7P47929 136 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 SLC25A17O43808 307 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 SRSF10O75494 262 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 VAMP5O95183 116 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 PTHLHP12272 177 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 LINC01465Q8N7H1 131 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 PRDM14Q9GZV8 571 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 A4GALTQ9NPC4 353 aa11.18□□□□□ -0.62
CACNA1C-209ENST00000399603 NDUFS8O00217 210 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 CDS2O95674 445 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 IL4P05112 153 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 POU3F3P20264 500 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 CDAP32320 146 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 SHBQ15464 509 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 SLC25A35Q3KQZ1 300 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 CLEC18BQ6UXF7 455 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 SLCO1C1Q9NYB5 712 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 MRPS16Q9Y3D3 137 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 APOBEC1P41238 236 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 TFPI2P48307 235 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 RPS4XP62701 263 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 ZNF740Q8NDX6 193 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 TM4SF18Q96CE8 201 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 HSPB9Q9BQS6 159 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 MYH7P12883 1935 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 TCRBV16S1A1N1A0A5B0 115 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 KLKB1P03952 638 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 ZNF385CQ66K41 422 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 ACSM5Q6NUN0 579 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 LDLRAD3Q86YD5 345 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 CDCA3Q99618 268 aaPredicted RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 GDE1Q9NZC3 331 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 NUP188Q5SRE5 1749 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 TCRBV5S1A1TA0A578 114 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 GNG7O60262 68 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 EVX1P49640 407 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 NTNG2Q96CW9 530 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 JAM3Q9BX67 310 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 S1PR5Q9H228 398 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 HEATR1Q9H583 2144 aaKnown RBP11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 MYH8P13535 1937 aa11.17□□□□□ -0.62
CACNA1C-209ENST00000399603 IGHV3-21A0A0B4J1V1 117 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 CGB1A6NKQ9 187 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 SMIM6P0DI80 62 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 CD81P60033 236 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 CKS1BP61024 79 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 FZD2Q14332 565 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 RNF165Q6ZSG1 346 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 TRAF4Q9BUZ4 470 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 CCL17Q92583 94 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 ALG14Q96F25 216 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 LGALSLQ3ZCW2 172 aaPredicted RBP11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 SIGLEC11Q96RL6 698 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 R4GMQ9 66 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 C7orf71A4D174 169 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 PTGFRP43088 359 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 GP2P55259 537 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 WFDC5Q8TCV5 224 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 FAM222BQ8WU58 562 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 CHRNA10Q9GZZ6 450 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 SPAG17Q6Q759 2223 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 RPS19BP1Q86WX3 136 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 RPS4Y2Q8TD47 263 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 NUDT16L1Q9BRJ7 211 aaKnown RBP11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 ZBP1Q9H171 429 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 A0A1B0GV90 55 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 NGFP01138 241 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 KCNAB1Q14722 419 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 PHOSPHO2Q8TCD6 241 aa11.16□□□□□ -0.62
CACNA1C-209ENST00000399603 EIF4E2O60573 245 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 PPP1CAP62136 330 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 ELAVL1Q15717 326 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 DUSP5Q16690 384 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 SLC25A30Q5SVS4 291 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 BTLAQ7Z6A9 289 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 DOT1LQ8TEK3 1739 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 CXCL13O43927 109 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 RGP1Q92546 391 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 NEURL3Q96EH8 262 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 TMEM129A0AVI4 362 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 KIR3DL2P43630 455 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 CSNK1DP48730 415 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 PARM1Q6UWI2 310 aa11.15□□□□□ -0.62
CACNA1C-209ENST00000399603 WDFY1Q8IWB7 410 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms