RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 TNFSF11O14788 317 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 MVDP53602 400 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 CLDN2P57739 230 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 PPP1R1AQ13522 171 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF750Q32MQ0 723 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 AMER3Q8N944 861 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 PIGCQ92535 297 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 WNT2BQ93097 391 aa8.58□□□□□ -1.04
SMAD9-203ENST00000399275 XIRP1Q702N8 1843 aaKnown RBP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 SLX4Q8IY92 1834 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 KIR2DS1A0A191URI9 304 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 CTNSO60931 367 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 FPR2P25090 351 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 KIR2DS4P43632 304 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 KIR2DS1Q14954 304 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 C2orf27AQ580R0 203 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 TFAP2EQ6VUC0 442 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 MS4A6EQ96DS6 147 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 C14orf144Q96I85 54 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 C19orf53Q9UNZ5 99 aaPredicted RBP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 COL24A1Q17RW2 1714 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 CITO14578 2027 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 H3BUT2 72 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 P2RY10O00398 339 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 HLA-DRB1P01911 266 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 CTXN2P0C2S0 81 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 TFPI2P48307 235 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 SUB1P53999 127 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 YBX1P67809 324 aaKnown RBP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 MZT1Q08AG7 82 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 DUSP5Q16690 384 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 TAS1R1Q7RTX1 841 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 ARRDC1Q8N5I2 433 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 GEMIN7Q9H840 131 aaKnown RBP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 BOKQ9UMX3 212 aaPredicted RBP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 INSL6Q9Y581 213 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 C9orf170A2RU37 121 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 OR2T8A6NH00 312 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 HOXB2P14652 356 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 MMP9P14780 707 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 METAP1P53582 386 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 DCAF7P61962 342 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF345Q14585 488 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 LAIR2Q6ISS4 152 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF683Q8IZ20 524 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 SGMS2Q8NHU3 365 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 PIK3IP1Q96FE7 263 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 NGBQ9NPG2 151 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 RCC2Q9P258 522 aaKnown RBP8.57□□□□□ -1.04
SMAD9-203ENST00000399275 NTNG1Q9Y2I2 539 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 EMC9Q9Y3B6 208 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 AUP1Q9Y679 476 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 A1L4Q6 167 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 HSPB6O14558 160 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 RHOBP62745 196 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 LRRC29Q8WV35 223 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 ROBO4Q8WZ75 1007 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 C5orf30Q96GV9 206 aa8.57□□□□□ -1.04
SMAD9-203ENST00000399275 A0A1W2PR48 441 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 MT-CO3P00414 261 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 SLC37A1P57057 533 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 KLF9Q13886 244 aaPredicted RBP8.56□□□□□ -1.04
SMAD9-203ENST00000399275 RTL8BQ17RB0 113 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 TMEM95Q3KNT9 176 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 TRAT1Q6PIZ9 186 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 RARRES2Q99969 163 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 APOOQ9BUR5 198 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 R3HDMLQ9H3Y0 253 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 GNG12Q9UBI6 72 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 OR51B2Q9Y5P1 312 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 PMS2P1A4D2B8 440 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 ACTL6AO96019 429 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 FAHP16930 419 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 INSL4Q14641 139 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 CA13Q8N1Q1 262 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 OR4S2Q8NH73 311 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 CD99L2Q8TCZ2 262 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 PCGF1Q9BSM1 259 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 LYRM4Q9HD34 91 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 MARCH5Q9NX47 278 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 TAS2R4Q9NYW5 299 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 SLC17A4Q9Y2C5 497 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 FER1L6Q2WGJ9 1857 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.56□□□□□ -1.04
SMAD9-203ENST00000399275 DPRXA6NFQ7 191 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 LEPROTL1O95214 131 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 DUS4LO95620 317 aaKnown RBP8.56□□□□□ -1.04
SMAD9-203ENST00000399275 TYMSP04818 313 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 ESDP10768 282 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 IL13RA2Q14627 380 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 ZNF595Q8IYB9 648 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 OR10J5Q8NHC4 309 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 NXPE3Q969Y0 559 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 WDR34Q96EX3 536 aa8.56□□□□□ -1.04
SMAD9-203ENST00000399275 FNDC4Q9H6D8 234 aaPredicted RBP8.56□□□□□ -1.04
SMAD9-203ENST00000399275 SLC25A22Q9H936 323 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms