RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TSC2P49815 1807 aa12.91□□□□□ -0.34
RPRD1A-202ENST00000399022 AQP7O14520 342 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 PNPP00491 289 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 THY1P04216 161 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 FHITP49789 147 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 GGTLC2Q14390 218 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 DCAF12Q5T6F0 453 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 FIP1L1Q6UN15 594 aaKnown RBP12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 ZNF813Q6ZN06 617 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 CYB561D1Q8N8Q1 229 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 NTNG2Q96CW9 530 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 OR10C1Q96KK4 312 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 RNF150Q9ULK6 438 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 TRBV5-5A0A0J9YX44 114 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 C20orf202A1L168 122 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 H0YL77 283 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 CDC14BO60729 498 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 ZIC2O95409 532 aaPredicted RBP12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 MYBPHQ13203 477 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 MPV17LQ2QL34 196 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 AMELYQ99218 206 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 SLC26A1Q9H2B4 701 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 UPK3AO75631 287 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 MGST1P10620 155 aaKnown RBP12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 FAM3AP98173 230 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 FUT7Q11130 342 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 IL13RA2Q14627 380 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 PDCD1Q15116 288 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 PTPMT1Q8WUK0 201 aaPredicted RBP12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 SARGQ9BW04 601 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 FKBP11Q9NYL4 201 aa12.9□□□□□ -0.34
RPRD1A-202ENST00000399022 MT-CO2P00403 227 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 KISS1Q15726 138 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 ZNF684Q5T5D7 378 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 MSL2Q9HCI7 577 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 MCTS1Q9ULC4 181 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 TP53TG5Q9Y2B4 290 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 PGA4P0DJD7 388 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 PGA5P0DJD9 388 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 CHRNA7P36544 502 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 NHLH2Q02577 135 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 ZNF343Q6P1L6 599 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 M1APQ8TC57 530 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 GNRHR2Q96P88 292 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 MFRPQ9BY79 579 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 TMED3Q9Y3Q3 217 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 TGIF2-C20orf24A0A0A6YYL0 155 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 LOC102725191A0A1B0GVB3 256 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 HNRNPA3P51991 378 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 NXPH1P58417 271 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 UBE2NP61088 152 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 RANP62826 216 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 RAB31Q13636 194 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 NOL4LQ96MY1 436 aaPredicted RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 ATG101Q9BSB4 218 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 MENTQ9BUN1 341 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 PTPRDP23468 1912 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 DVL1O14640 695 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 TCF21O43680 179 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 MMP9P14780 707 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 PPP1CCP36873 323 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 RPS11P62280 158 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 EFNB1P98172 346 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 PNRC1Q12796 327 aaPredicted RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 PHYHD1Q5SRE7 291 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 SMRP1Q8NCR6 262 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 FUT9Q9Y231 359 aa12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 TP53BP1Q12888 1972 aaPredicted RBP12.89□□□□□ -0.35
RPRD1A-202ENST00000399022 SPRY1O43609 319 aaPredicted RBP12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 TUSC2O75896 110 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 NGFRP08138 427 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 MSR1P21757 451 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 LIMK1P53667 647 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 TPPP2P59282 170 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 TAS2R60P59551 318 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 MRPL49Q13405 166 aaKnown RBP12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 LY6G6FQ5SQ64 297 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 MAML2Q8IZL2 1156 aaPredicted RBP12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 AQP10Q96PS8 301 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 IL9P15248 144 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 FOXO1Q12778 655 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 KLF4O43474 513 aa12.88□□□□□ -0.35
RPRD1A-202ENST00000399022 ATP6V0CP27449 155 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms