RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 AMBNQ9NP70 447 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 INPP5EQ9NRR6 644 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 RBFOX1Q9NWB1 397 aaKnown RBP10.91□□□□□ -0.66
VCX3A-202ENST00000398729 FAM118AQ9NWS6 357 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 GLS2Q9UI32 602 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 MYRFQ9Y2G1 1151 aa10.91□□□□□ -0.66
VCX3A-202ENST00000398729 RPL36Q9Y3U8 105 aaKnown RBP10.91□□□□□ -0.66
VCX3A-202ENST00000398729 TSPAN9O75954 239 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 CLPXO76031 633 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 BAG2O95816 211 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 IGHA1P01876 353 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 RBP4P02753 201 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF728P0DKX0 622 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 BCL3P20749 454 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 GABRR1P24046 479 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 PEX2P28328 305 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 NPBWR2P48146 333 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 BMXP51813 675 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 DLX6P56179 175 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 PROK1P58294 105 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 MEF2CQ06413 473 aaPredicted RBP10.9□□□□□ -0.66
VCX3A-202ENST00000398729 RAB40BQ12829 278 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 PDZK1IP1Q13113 114 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 EDDM3AQ14507 147 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF146Q15072 292 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 AANATQ16613 207 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF782Q6ZMW2 699 aaPredicted RBP10.9□□□□□ -0.66
VCX3A-202ENST00000398729 OR51A4Q8NGJ6 313 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 PPP1R35Q8TAP8 253 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 AJUBAQ96IF1 538 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 ZNF714Q96N38 554 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 PPA2Q9H2U2 334 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 ISG20L2Q9H9L3 353 aaKnown RBP10.9□□□□□ -0.66
VCX3A-202ENST00000398729 ERVK13-1Q9NX77 482 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 IL36RNQ9UBH0 155 aa10.9□□□□□ -0.66
VCX3A-202ENST00000398729 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 TMEM82A0PJX8 343 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 TMEM212A6NML5 194 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 TIMM23O14925 209 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 MT-ND2P03891 347 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 CCDC159P0C7I6 412 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 PRKACAP17612 351 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 DUSP1P28562 367 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 GBX2P52951 348 aaPredicted RBP10.89□□□□□ -0.67
VCX3A-202ENST00000398729 GRK1Q15835 563 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 KLHL22Q53GT1 634 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 SPIN3Q5JUX0 258 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 ZNF555Q8NEP9 628 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 OR52I1Q8NGK6 324 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 OR13C9Q8NGT0 318 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 OR13D1Q8NGV5 346 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 HAVCR2Q8TDQ0 301 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 STMN2Q93045 179 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 RFT1Q96AA3 541 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 RDH12Q96NR8 316 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 CHST6Q9GZX3 395 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 COMMD4Q9H0A8 199 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 ZCCHC4Q9H5U6 513 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 HMG20AQ9NP66 347 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 RAB18Q9NP72 206 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 MRPS18AQ9NVS2 196 aaKnown RBP10.89□□□□□ -0.67
VCX3A-202ENST00000398729 PCDHGB5Q9Y5G0 923 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 DSCAML1Q8TD84 2053 aa10.89□□□□□ -0.67
VCX3A-202ENST00000398729 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
VCX3A-202ENST00000398729 M0QZ24 198 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 SH2D1BO14796 132 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 MGST3O14880 152 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 PSPNO60542 156 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 ZFPL1O95159 310 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 ARG1P05089 322 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 IGHV1-8P0DP01 117 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 CALCBP10092 127 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 SNU13P55769 128 aaKnown RBP10.88□□□□□ -0.67
VCX3A-202ENST00000398729 KRTAP10-3P60369 221 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 LY6EQ16553 131 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 ZSCAN26Q16670 478 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 HIST2H2BDQ6DRA6 164 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 SLC35E4Q6ICL7 350 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 SERPINA12Q8IW75 414 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 OR52N4Q8NGI2 321 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 OR5D18Q8NGL1 313 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 OR5D14Q8NGL3 314 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 OR5AK2Q8NH90 309 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 FOXRED1Q96CU9 486 aaPredicted RBP10.88□□□□□ -0.67
VCX3A-202ENST00000398729 SPACA5Q96QH8 159 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 PDCD1LG2Q9BQ51 273 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 ZNF649Q9BS31 505 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 RHOFQ9HBH0 211 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 EXOSC4Q9NPD3 245 aaKnown RBP10.88□□□□□ -0.67
VCX3A-202ENST00000398729 SMPD3Q9NY59 655 aaPredicted RBP10.88□□□□□ -0.67
VCX3A-202ENST00000398729 GSTK1Q9Y2Q3 226 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 TBL2Q9Y4P3 447 aaKnown RBP10.88□□□□□ -0.67
VCX3A-202ENST00000398729 LINC00312Q9Y6C7 94 aa10.88□□□□□ -0.67
VCX3A-202ENST00000398729 RYR3Q15413 4870 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 IGKV1-12A0A0C4DH73 117 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 KDM4BO94953 1096 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 IGKV1D-12P01611 117 aa10.87□□□□□ -0.67
VCX3A-202ENST00000398729 HCKP08631 526 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms