RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PTP4A1Q93096 173 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 HGDQ93099 445 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 FOSL1P15407 271 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 SLC25A1P53007 311 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 CALHM3Q86XJ0 350 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 ADAMTS17Q8TE56 1095 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 LINC00052Q96N35 136 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 GYPAP02724 150 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 MPGP29372 298 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 TMEM229BQ8NBD8 167 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 TRAV1-2A0A0B4J238 106 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 G3V3Q6 166 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 TGIF2LYQ8IUE0 185 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 C10orf90Q96M02 699 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 FKBP11Q9NYL4 201 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 RABAC1Q9UI14 185 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 CD160O95971 181 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 NHLRC1Q6VVB1 395 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 DGAT2L6Q6ZPD8 337 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 OR10AC1Q8NH08 325 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 CACNG5Q9UF02 275 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 SMIM18P0DKX4 95 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 TPPP2P59282 170 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 Q1RN00 199 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 OR2H1Q9GZK4 316 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 INSIG2Q9Y5U4 225 aa10.02□□□□□ -0.81
TTC28-201ENST00000397906 KIR2DS2P43631 304 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 GPR35Q9HC97 309 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 HILPDAQ9Y5L2 63 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 COL5A3P25940 1745 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 COL11A1P12107 1806 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 CD96P40200 585 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 MDP1Q86V88 176 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 WDR54Q9H977 334 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 GEMIN2O14893 280 aaKnown RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 LANCL1O43813 399 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 MOSPD3O75425 235 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 CLDN20P56880 219 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 BTG1P62324 171 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 TSPO2Q5TGU0 170 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 WDR89Q96FK6 387 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 ZNF665Q9H7R5 613 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 COL4A5P29400 1685 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 ASB5Q8WWX0 329 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 IGHV1-45A0A0A0MS14 117 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 EAF1Q96JC9 268 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 RGPD3A6NKT7 1758 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 PNPP00491 289 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 ID4P47928 161 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 ASAH1Q13510 395 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 GVQW1Q8N7I0 195 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 MS4A5Q9H3V2 200 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 GPR6P46095 362 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 ZNF425Q6IV72 752 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 ZAR1Q86SH2 424 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 PECRQ9BY49 303 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 A0A1W2PPQ1 181 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 PAX5Q02548 391 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 MED30Q96HR3 178 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 UQCC2Q9BRT2 126 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 TMEFF2Q9UIK5 374 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 PILRBQ9UKJ0 227 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 MRPS11P82912 194 aaKnown RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 FHL5Q5TD97 284 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 OR10Z1Q8NGY1 313 aa10.01□□□□□ -0.81
TTC28-201ENST00000397906 ZNF275Q9NSD4 429 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 SLC25A10Q9UBX3 287 aaPredicted RBP10.01□□□□□ -0.81
TTC28-201ENST00000397906 A0A1W2PPV9 198 aa10□□□□□ -0.81
TTC28-201ENST00000397906 CDK5Q00535 292 aa10□□□□□ -0.81
TTC28-201ENST00000397906 PRR19A6NJB7 356 aa10□□□□□ -0.81
TTC28-201ENST00000397906 ANKRD34CP0C6C1 535 aa10□□□□□ -0.81
TTC28-201ENST00000397906 FPR2P25090 351 aa10□□□□□ -0.81
TTC28-201ENST00000397906 PMELP40967 661 aa10□□□□□ -0.81
TTC28-201ENST00000397906 KIAA0040Q15053 153 aa10□□□□□ -0.81
TTC28-201ENST00000397906 FBXW9Q5XUX1 488 aa10□□□□□ -0.81
TTC28-201ENST00000397906 SIGLECL1Q8N7X8 197 aa10□□□□□ -0.81
TTC28-201ENST00000397906 OR5B21A6NL26 309 aa10□□□□□ -0.81
TTC28-201ENST00000397906 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
TTC28-201ENST00000397906 ZNF485Q8NCK3 441 aa10□□□□□ -0.81
TTC28-201ENST00000397906 DYRK2Q92630 601 aa10□□□□□ -0.81
TTC28-201ENST00000397906 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
TTC28-201ENST00000397906 NKX6-2Q9C056 277 aaPredicted RBP10□□□□□ -0.81
TTC28-201ENST00000397906 ZMIZ1Q9ULJ6 1067 aa10□□□□□ -0.81
TTC28-201ENST00000397906 KPTNQ9Y664 436 aa10□□□□□ -0.81
TTC28-201ENST00000397906 TRAV39A0A0B4J263 110 aa10□□□□□ -0.81
TTC28-201ENST00000397906 DNPH1O43598 174 aa10□□□□□ -0.81
TTC28-201ENST00000397906 LIMS3P0CW19 117 aa10□□□□□ -0.81
TTC28-201ENST00000397906 LIMS4P0CW20 117 aa10□□□□□ -0.81
TTC28-201ENST00000397906 CDC20Q12834 499 aa10□□□□□ -0.81
TTC28-201ENST00000397906 LILRB4Q8NHJ6 448 aa10□□□□□ -0.81
TTC28-201ENST00000397906 ZNF721Q8TF20 911 aa10□□□□□ -0.81
TTC28-201ENST00000397906 OOEPA6NGQ2 149 aa10□□□□□ -0.81
TTC28-201ENST00000397906 PRSS44E7EML9 344 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms