RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CD80P33681 288 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 TAGLNQ01995 201 aaKnown RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 RBM39Q14498 530 aaKnown RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 ZNF239Q16600 458 aaKnown RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 TMEM268Q5VZI3 342 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 RPUSD3Q6P087 351 aaKnown RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 CXorf67Q86X51 503 aaPredicted RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 OR2M7Q8NG81 312 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 H3BP45 60 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 RBMXL2O75526 392 aaKnown RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 ONECUT2O95948 504 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 BCL3P20749 454 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 PRDX4Q13162 271 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 C10orf128Q5T292 105 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 LHFPL2Q6ZUX7 228 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 CPEB3Q8NE35 698 aaKnown RBP9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 CD300LFQ8TDQ1 290 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 EXTL1Q92935 676 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 SYT3Q9BQG1 590 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 GHRLQ9UBU3 117 aa9.06□□□□□ -0.96
CPSF1P1-201ENST00000397477 LRRC3CA6NJW4 275 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 MT-CO3P00414 261 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 HPP00738 406 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 GRPP07492 148 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 CA6P23280 308 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SPEM2Q0P670 501 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 PDZK1IP1Q13113 114 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 GNMTQ14749 295 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 EIF5AL1Q6IS14 154 aaKnown RBP9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FAM122CQ6P4D5 195 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 MRPS24Q96EL2 167 aaKnown RBP9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 PIK3IP1Q96FE7 263 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FAM173AQ9BQD7 235 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 OCSTAMPQ9BR26 566 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SLC2A8Q9NY64 477 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 STARD10Q9Y365 291 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 TMEM265A0A087WTH1 108 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 ANKRD30BLA7E2S9 258 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 TK1P04183 234 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 CST2P09228 141 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 CAMLGP49069 296 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FUT6P51993 359 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FAM3AP98173 230 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 DHODHQ02127 395 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 HIST3H3Q16695 136 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 DCAF10Q5QP82 559 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 VAX1Q5SQQ9 334 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 HES3Q5TGS1 186 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 AADACL3Q5VUY0 350 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 OVCH2Q7RTZ1 564 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 RAB18Q9NP72 206 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 IGKV1-12A0A0C4DH73 117 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 C9orf172C9J069 976 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SYNGR3O43761 229 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 IGKV1D-12P01611 117 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 CD8AP01732 235 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SELEP16581 610 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 AADACP22760 399 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 MEOX1P50221 254 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 LTC4SQ16873 150 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FAM74A3Q4VXF1 159 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 GGNQ86UU5 652 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SPAG16Q8N0X2 631 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 TMEM251Q8N6I4 163 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 PSMF1Q92530 271 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 MARS2Q96GW9 593 aaKnown RBP9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 RNF126Q9BV68 326 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SF3B5Q9BWJ5 86 aaKnown RBP9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FBXL17Q9UF56 701 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FZR1Q9UM11 496 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 FRYQ5TBA9 3013 aa9.05□□□□□ -0.96
CPSF1P1-201ENST00000397477 SIRPB1O00241 398 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 C1QL1O75973 258 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 TSPAN15O95858 294 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 FCGR3AP08637 254 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 OR8U9P0C7N5 309 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 CLN3Q13286 438 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 PRSS54Q6PEW0 395 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 CBLN2Q8IUK8 224 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 PLPPR2Q96GM1 343 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 Q96M66 194 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 REG4Q9BYZ8 158 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 TTTY12Q9BZ98 90 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 PCDHB16Q9NRJ7 776 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 PRSS50Q9UI38 385 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 ZNF107Q9UII5 783 aaPredicted RBP9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 PIEZO2Q9H5I5 2752 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 ZNF716A6NP11 495 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 GP1BAP07359 652 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 FUT3P21217 361 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 UBE2NP61088 152 aaKnown RBP9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 SLC10A1Q14973 349 aa9.04□□□□□ -0.96
CPSF1P1-201ENST00000397477 KCNMB1Q16558 191 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms