RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 AUNIPQ9H7T9 357 aa17.85■□□□□ 0.45
CPNE1-204ENST00000397443 IGHV3OR15-7A0A075B7D8 119 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 MEIOCA2RUB1 952 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 MEIS3P1A6NDR6 274 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 FCER2P06734 321 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 CDKN1AP38936 164 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 PPOXP50336 477 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 GUCA2AQ02747 115 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 FAM189A2Q15884 450 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 DTX2Q86UW9 622 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 BORCS5Q969J3 196 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 PLEKHJ1Q9NW61 149 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 RNF7Q9UBF6 113 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 NOS1APO75052 506 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-204ENST00000397443 SCGNO76038 276 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 LY6HO94772 140 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 IRF2P14316 349 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 CD80P33681 288 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 ACP7Q6ZNF0 438 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 OR11L1Q8NGX0 322 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 NEDD4LQ96PU5 975 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 DNAJB11Q9UBS4 358 aa17.84■□□□□ 0.45
CPNE1-204ENST00000397443 FASNP49327 2511 aaKnown RBP17.84■□□□□ 0.45
CPNE1-204ENST00000397443 A0A0A6YYH2 397 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 A6NJ64 397 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 SRRM5B3KS81 715 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 LYNX1G3V0Z9 82 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 CD3GP09693 182 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 LYNX1P0DP58 116 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 TLE4Q04727 773 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 GDPD1Q8N9F7 314 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 PECRQ9BY49 303 aa17.83■□□□□ 0.44
CPNE1-204ENST00000397443 LINC00854A0A1B0GVQ3 168 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 ZNF44P15621 663 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 HIST1H1DP16402 221 aaKnown RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 PTBP1P26599 531 aaKnown RBP eCLIP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 SMIM21Q3B7S5 101 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 ZNF260Q3ZCT1 412 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 DEFB108BQ8NET1 73 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 OR52I2Q8NH67 350 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 NUDCD2Q8WVJ2 157 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 DYRK2Q92630 601 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 FAAP24Q9BTP7 215 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 RAB1BQ9H0U4 201 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 HES4Q9HCC6 221 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 KCNK7Q9Y2U2 307 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 RAI1Q7Z5J4 1906 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 FOXI3A8MTJ6 420 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 SIRPB1O00241 398 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 LANCL1O43813 399 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 GOSR1O95249 250 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 ACAA1P09110 424 aaPredicted RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 CSF3P09919 207 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 DCTN2Q13561 401 aaKnown RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 FIP1L1Q6UN15 594 aaKnown RBP17.82■□□□□ 0.44
CPNE1-204ENST00000397443 DCDC5Q6ZRR9 648 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 OR10Z1Q8NGY1 313 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 ERGIC1Q969X5 290 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 PLEKHF2Q9H8W4 249 aa17.82■□□□□ 0.44
CPNE1-204ENST00000397443 IGHV1-69-2A0A0G2JMI3 117 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 UBE2QL1A1L167 161 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 LRRC30A6NM36 301 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 PRSS3P35030 304 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 IFITM3Q01628 133 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 NHLRC3Q5JS37 347 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 BPIFB2Q8N4F0 458 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 Q8TCH9 128 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 RDH5Q92781 318 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 THAP7Q9BT49 309 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-204ENST00000397443 RHOFQ9HBH0 211 aa17.81■□□□□ 0.44
CPNE1-204ENST00000397443 RFPL4AA6NLU0 287 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 RFPL4AL1F8VTS6 287 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 DEGS1O15121 323 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 UPK1BO75841 260 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 LHBP01229 141 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 IL7P13232 177 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 CHATP28329 748 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 CFHR2P36980 270 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 SULT4A1Q9BR01 284 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 CCDC32Q9BV29 185 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 ING3Q9NXR8 418 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 KLK11Q9UBX7 282 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 NPTNQ9Y639 398 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 CELSR2Q9HCU4 2923 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 MFNGO00587 321 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 PDCD6O75340 191 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 OR2H2O95918 312 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 HAND1O96004 215 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 FUT3P21217 361 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 ARFRP1Q13795 201 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 TRIQKQ629K1 86 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 ZNF295-AS1Q8N0V1 137 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 NEK7Q8TDX7 302 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 SMIM4Q8WVI0 70 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 FCAMRQ8WWV6 532 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 HPS1Q92902 700 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 TMEM106BQ9NUM4 274 aa17.8■□□□□ 0.44
CPNE1-204ENST00000397443 A0A1W2PQ09 198 aa17.79■□□□□ 0.44
CPNE1-204ENST00000397443 NDUFS7O75251 213 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms