RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-206ENST00000397163 TSPO2Q5TGU0 170 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 LYZL2Q7Z4W2 148 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 NOXO1Q8NFA2 376 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 PIGTQ969N2 578 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 KLHDC7BQ96G42 594 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 REEP6Q96HR9 211 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 CDCA3Q99618 268 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-206ENST00000397163 ABHD14AQ9BUJ0 271 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 CYP8B1Q9UNU6 501 aa8.02□□□□□ -1.13
CAPN3-206ENST00000397163 CPAMD8Q8IZJ3 1885 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 C5orf63A6NC05 138 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 EPOPA6NHQ4 379 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 PTBP3O95758 552 aaKnown RBP8.01□□□□□ -1.13
CAPN3-206ENST00000397163 IL18BPO95998 194 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 HOXA6P31267 233 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 SUCLG1P53597 346 aaKnown RBP8.01□□□□□ -1.13
CAPN3-206ENST00000397163 DLK1P80370 383 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 C17orf67Q0P5P2 114 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 PHLDA2Q53GA4 152 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 LFNGQ8NES3 379 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 OR10J5Q8NHC4 309 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 LMX1AQ8TE12 382 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 HPSE2Q8WWQ2 592 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 MRPL13Q9BYD1 178 aaKnown RBP8.01□□□□□ -1.13
CAPN3-206ENST00000397163 B3GAT1Q9P2W7 334 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 NXT1Q9UKK6 140 aaKnown RBP8.01□□□□□ -1.13
CAPN3-206ENST00000397163 RTTNQ86VV8 2226 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF724A8MTY0 619 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 F5H5K5 113 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 LINC01565O15544 149 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 PGA3P0DJD8 388 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 FAHP16930 419 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 IGFBP4P22692 258 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 OPRM1P35372 400 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 RAB4BP61018 213 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 MYBPHQ13203 477 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 GPR157Q5UAW9 335 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 FBXW12Q6X9E4 464 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 SLC38A9Q8NBW4 561 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 RTN4IP1Q8WWV3 396 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-206ENST00000397163 VN1R1Q9GZP7 353 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 NAA60Q9H7X0 242 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 PPP1R14DQ9NXH3 145 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 KLHL13Q9P2N7 655 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 B3GALT1Q9Y5Z6 326 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 NSG1A0A0A6YYJ2 146 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 FOXI3A8MTJ6 420 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-206ENST00000397163 C9J4A7 227 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 OR4A8P0C604 315 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF728P0DKX0 622 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 RRADP55042 308 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 BATFQ16520 125 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 CLEC12BQ2HXU8 276 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 KIAA0895LQ68EN5 471 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 RTL6Q6ICC9 239 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF441Q8N8Z8 693 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 STT3BQ8TCJ2 826 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 ANXA10Q9UJ72 324 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 GOLT1BQ9Y3E0 138 aa8.01□□□□□ -1.13
CAPN3-206ENST00000397163 E9PLN8 166 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 ADAM10O14672 748 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 ST8SIA3O43173 380 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 TNFSF12O43508 249 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 CCL1P22362 96 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 FASLGP48023 281 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 HIST2H3PS2Q5TEC6 136 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 ARL6IP6Q8N6S5 226 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 OR52M1Q8NGK5 317 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 OR5L1Q8NGL2 311 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 OR6X1Q8NH79 312 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 TMEM208Q9BTX3 173 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF700Q9H0M5 742 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF160Q9HCG1 818 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 KLRF1Q9NZS2 232 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 LIPGQ9Y5X9 500 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 A0A1W2PNR3 127 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
CAPN3-206ENST00000397163 RRP8O43159 456 aaKnown RBP8□□□□□ -1.13
CAPN3-206ENST00000397163 FGF7P21781 194 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 DUSP1P28562 367 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 ZNF41P51814 821 aaPredicted RBP8□□□□□ -1.13
CAPN3-206ENST00000397163 MRPS21P82921 87 aaKnown RBP8□□□□□ -1.13
CAPN3-206ENST00000397163 TRA2AQ13595 282 aaKnown RBP eCLIP8□□□□□ -1.13
CAPN3-206ENST00000397163 TMEM187Q14656 261 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 NCR3LG1Q68D85 454 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 SSC4DQ8WTU2 575 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 FAAP24Q9BTP7 215 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 TM2D1Q9BX74 207 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 PNRC2Q9NPJ4 139 aaKnown RBP8□□□□□ -1.13
CAPN3-206ENST00000397163 SPAG17Q6Q759 2223 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 CHD9Q3L8U1 2897 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
CAPN3-206ENST00000397163 A0A1W2PNV4 684 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 LILRA5A6NI73 299 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 MKRN2OSH3BPM6 223 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 FUT3P21217 361 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 GRB2P62993 217 aaKnown RBP7.99□□□□□ -1.13
CAPN3-206ENST00000397163 GNMTQ14749 295 aa7.99□□□□□ -1.13
CAPN3-206ENST00000397163 SLC10A1Q14973 349 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms