RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 OR2V2Q96R30 315 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 DIRC2Q96SL1 478 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 SOSTQ9BQB4 213 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 DYNLRB1Q9NP97 96 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 A0A096LNT2 108 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 A0A0G2JMP0 313 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 A0A0X1KG70 313 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 SYNGR1O43759 233 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 BCL3P20749 454 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 RPS27AP62979 156 aaKnown RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 TNFAIP6P98066 277 aaPredicted RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 IFITM3Q01628 133 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 ZNF79Q15937 498 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 PRAMEF6Q5VXH4 476 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 PYHIN1Q6K0P9 492 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 OSR2Q8N2R0 312 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 CELF2-AS1Q8N7Q2 184 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 DRAXINQ8NBI3 349 aaPredicted RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 OR4M2Q8NGB6 313 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 C15orf40Q8WUR7 153 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 SDHCQ99643 169 aaPredicted RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 TRAF4Q9BUZ4 470 aaPredicted RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 FAIMQ9NVQ4 179 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 MTCH1Q9NZJ7 389 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 C17orf100A8MU93 164 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 TPD52L2O43399 206 aaKnown RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 IGHV1-46P01743 117 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 SFTPBP07988 381 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 CHRM2P08172 466 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 FAM157CP0CG43 387 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 CPT2P23786 658 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 NPBWR2P48146 333 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 VEGFCP49767 419 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 SNRPD2P62316 118 aaKnown RBP11.17□□□□□ -0.62
SEC13-209ENST00000397117 Q8IYB0 196 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 BATF2Q8N1L9 274 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 GDPD1Q8N9F7 314 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 CHST4Q8NCG5 386 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 OR56B1Q8NGI3 324 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 MEGF10Q96KG7 1140 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 SRRQ9GZT4 340 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 LPAR5Q9H1C0 372 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 TLNRD1Q9H1K6 362 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 FN3KRPQ9HA64 309 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 RHOFQ9HBH0 211 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 UFSP2Q9NUQ7 469 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 IL19Q9UHD0 177 aa11.17□□□□□ -0.62
SEC13-209ENST00000397117 MALRD1Q5VYJ5 2156 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 TRAV18A0A075B6X5 111 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 hCG_1807616A0A1W2PRN6 198 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 RHBDL1O75783 438 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 UPK1BO75841 260 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 TPPPO94811 219 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 MNDAP41218 407 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 TAS2R20P59543 309 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 MPPED2Q15777 294 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 ELP2Q6IA86 826 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 DTX2Q86UW9 622 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 SNX29P2Q8IUI4 249 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 ITLN1Q8WWA0 313 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 NICN1Q9BSH3 213 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 CCDC32Q9BV29 185 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 TM2D1Q9BX74 207 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 EGLN1Q9GZT9 426 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 BARX1Q9HBU1 254 aaPredicted RBP11.16□□□□□ -0.62
SEC13-209ENST00000397117 DECR2Q9NUI1 292 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 RBFOX1Q9NWB1 397 aaKnown RBP11.16□□□□□ -0.62
SEC13-209ENST00000397117 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 ST3GAL6Q9Y274 331 aa11.16□□□□□ -0.62
SEC13-209ENST00000397117 ANK2Q01484 3957 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 PTBP3O95758 552 aaKnown RBP11.15□□□□□ -0.62
SEC13-209ENST00000397117 ADH4P08319 380 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 PRKACAP17612 351 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 TNFRSF1AP19438 455 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 GABRR1P24046 479 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 FGF12P61328 243 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 ZNF181Q2M3W8 571 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 MST1LQ2TV78 715 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 PCGF3Q3KNV8 242 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 FAM209AQ5JX71 171 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 AGAP6Q5VW22 663 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 Q8N402 240 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 OR10R2Q8NGX6 335 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 CHPT1Q8WUD6 406 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 EMG1Q92979 244 aaKnown RBP11.15□□□□□ -0.62
SEC13-209ENST00000397117 Q96M66 194 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 ZNF488Q96MN9 340 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 ABHD1Q96SE0 405 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 NUDT16L1Q9BRJ7 211 aaKnown RBP11.15□□□□□ -0.62
SEC13-209ENST00000397117 TMEM160Q9NX00 188 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 FBXO9Q9UK97 447 aaPredicted RBP11.15□□□□□ -0.62
SEC13-209ENST00000397117 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
SEC13-209ENST00000397117 IGHV4-30-2A0A087WSY4 118 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 RAB27BO00194 218 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 AKR7A2O43488 359 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 NXPH2O95156 264 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 CD55P08174 381 aa11.14□□□□□ -0.63
SEC13-209ENST00000397117 ACAA1P09110 424 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms