RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RTN4IP1Q8WWV3 396 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-205ENST00000397017 GHRLQ9UBU3 117 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 OR5H14A6NHG9 310 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 PLEKHN1Q494U1 663 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-205ENST00000397017 ACTBL2Q562R1 376 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 CCDC71LQ8N9Z2 235 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 B3GNT2Q9NY97 397 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 IL36RNQ9UBH0 155 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
MCF2L-205ENST00000397017 VSIG10L2P0DP72 767 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
MCF2L-205ENST00000397017 TNFSF4P23510 183 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 LIMK1P53667 647 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 OR1K1Q8NGR3 316 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 OR10J5Q8NHC4 309 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 POLDIP2Q9Y2S7 368 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 MUC3AQ02505 3323 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 FREM2Q5SZK8 3169 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 GSTZ1O43708 216 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-205ENST00000397017 PDCD6O75340 191 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 GABRA1P14867 456 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 RAB6AP20340 208 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-205ENST00000397017 DEFA5Q01523 94 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 FAM27E3Q08E93 113 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 SULT4A1Q9BR01 284 aa13.15□□□□□ -0.3
MCF2L-205ENST00000397017 LUMP51884 338 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-205ENST00000397017 FGL1Q08830 312 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 Q5BKY6 102 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 RELL2Q8NC24 303 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-205ENST00000397017 OR13C8Q8NGS7 320 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 NABP1Q96AH0 204 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 ZNF391Q9UJN7 358 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 ZNF260Q3ZCT1 412 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 FOXD3Q9UJU5 478 aaPredicted RBP13.14□□□□□ -0.31
MCF2L-205ENST00000397017 AKR1D1P51857 326 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 ZNF616Q08AN1 781 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 TAS2R3Q9NYW6 316 aa13.14□□□□□ -0.31
MCF2L-205ENST00000397017 CTDSPLO15194 276 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 FAM74A1Q5RGS3 127 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 ABLIM2Q6H8Q1 611 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 NARFLQ9H6Q4 476 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 DLL1O00548 723 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 SH2D1BO14796 132 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 PPP3CBP16298 524 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 ANOS1P23352 680 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 PTGER4P35408 488 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 ASCL1P50553 236 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 CLINT1Q14677 625 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 RTL6Q6ICC9 239 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 TREM1Q9NP99 234 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 ASCL3Q9NQ33 180 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 C1orf123Q9NWV4 160 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 LRP3O75074 770 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 HGFACQ04756 655 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 SSX9Q7RTT3 188 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 LYG2Q86SG7 212 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 PAQR4Q8N4S7 273 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-205ENST00000397017 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
MCF2L-205ENST00000397017 MYO18BQ8IUG5 2567 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 IGHV3OR15-7A0A075B7D8 119 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 IFNA2P01563 188 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 UCP2P55851 309 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 CLEC9AQ6UXN8 241 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 ERRFI1Q9UJM3 462 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-205ENST00000397017 WASF3Q9UPY6 502 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 ANKRD34BA5PLL1 514 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 H3BP45 60 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 TRAPPC2P0DI81 140 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 TRAPPC2BP0DI82 140 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 DCAF12L2Q5VW00 463 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 TMEM268Q5VZI3 342 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 CCL17Q92583 94 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 SCMH1Q96GD3 660 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 NUP50Q9UKX7 468 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 VSIG4Q9Y279 399 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 TFF1P04155 84 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 IGHV1-2P23083 117 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 CCL8P80075 99 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 RPRMLQ8N4K4 120 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 MDS2Q8NDY4 140 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 PPP1R35Q8TAP8 253 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 SUCNR1Q9BXA5 334 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
MCF2L-205ENST00000397017 H3BUI4 141 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms