RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 WISP2O76076 250 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 CELA3BP08861 270 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 COX5AP20674 150 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 GLRA1P23415 457 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 SERPINF1P36955 418 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 EIF2S3P41091 472 aaKnown RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 IDH3GP51553 393 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 GNG3P63215 75 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 DAZAP2Q15038 168 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 MPV17LQ2QL34 196 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 TMEM211Q6ICI0 200 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 INO80CQ6PI98 192 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 BRICD5Q6PL45 260 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 IGFL3Q6UXB1 125 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 MYPOPQ86VE0 399 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 C1orf162Q8NEQ5 155 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 PPP1R1CQ8WVI7 109 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 DHRS9Q9BPW9 319 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 RAB18Q9NP72 206 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 FAM221AA4D161 298 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 LINC00862A6NCI5 91 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 EEF1E1-BLOC1S5C9J1V9 151 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 LILRA1O75019 489 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 HOXC12P31275 282 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 KIR2DL2P43627 348 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 PPP1CBP62140 327 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 PDCD1Q15116 288 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 SPATA46Q5T0L3 261 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 ZNF660Q6AZW8 331 aaPredicted RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 OR2T2Q6IF00 324 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 FBXW12Q6X9E4 464 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 ZNF573Q86YE8 665 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 EXTL1Q92935 676 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 TAAR6Q96RI8 345 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 RDH8Q9NYR8 311 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 RPS10-NUDT3A0A1W2PQS6 291 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 A0A1W2PR80 420 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 TUBAL3A6NHL2 446 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 AHRRA9YTQ3 701 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 RPS2P15880 293 aaKnown RBP12.81□□□□□ -0.36
CBX3-202ENST00000396386 PTGER4P35408 488 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 RAB14P61106 215 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 CYCSP99999 105 aaKnown RBP12.81□□□□□ -0.36
CBX3-202ENST00000396386 ZNF345Q14585 488 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 VWA1Q6PCB0 445 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 HAGHLQ6PII5 290 aaPredicted RBP12.81□□□□□ -0.36
CBX3-202ENST00000396386 LINC00596Q86U02 117 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 NMES1Q9C002 83 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 PLK3Q9H4B4 646 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
CBX3-202ENST00000396386 DECR2Q9NUI1 292 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 MTCH1Q9NZJ7 389 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 TNFSF18Q9UNG2 199 aa12.81□□□□□ -0.36
CBX3-202ENST00000396386 A0A0D9SG52 128 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 C13orf42A0A1B0GVH6 325 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 SYNGR1O43759 233 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 ANKRD55Q3KP44 614 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 THAP6Q8TBB0 222 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 MARS2Q96GW9 593 aaKnown RBP12.8□□□□□ -0.36
CBX3-202ENST00000396386 PKIBQ9C010 78 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 RCC2Q9P258 522 aaKnown RBP12.8□□□□□ -0.36
CBX3-202ENST00000396386 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 OR2F2O95006 317 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 KNG1P01042 644 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 IFNA2P01563 188 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 CRHP06850 196 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 PRKACAP17612 351 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 CA6P23280 308 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 IL32P24001 234 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 GLP1RP43220 463 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 IL24Q13007 206 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 OR2F1Q13607 317 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 PLEKHN1Q494U1 663 aaPredicted RBP12.8□□□□□ -0.36
CBX3-202ENST00000396386 DHRS11Q6UWP2 260 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 RTL8AQ9BWD3 113 aa12.8□□□□□ -0.36
CBX3-202ENST00000396386 F8VVB4 439 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 F8VWA3 439 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 J3QT63 122 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 KLK10O43240 276 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 ZNF728P0DKX0 622 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 CBR1P16152 277 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 CALCRP30988 508 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 RBMXP38159 391 aaKnown RBP12.79□□□□□ -0.36
CBX3-202ENST00000396386 ID4P47928 161 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 AP2S1P53680 142 aaPredicted RBP12.79□□□□□ -0.36
CBX3-202ENST00000396386 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 ZNF585AQ6P3V2 769 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 SGPP2Q8IWX5 399 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 KCNRGQ8N5I3 272 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 TOMM40LQ969M1 308 aa12.79□□□□□ -0.36
CBX3-202ENST00000396386 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms