RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 HILPDAQ9Y5L2 63 aa13.26□□□□□ -0.29
DDR1-229ENST00000396342 MEGF11A6BM72 1044 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 FAM90A8PA6NJQ4 464 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 PRR32B1ATL7 298 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 H3BSH0 61 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 M0R129 80 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 MGST3O14880 152 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 MITFO75030 526 aaPredicted RBP13.25□□□□□ -0.29
DDR1-229ENST00000396342 SRSF10O75494 262 aaKnown RBP13.25□□□□□ -0.29
DDR1-229ENST00000396342 CLIC3O95833 236 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 PRKACAP17612 351 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 DYNLT3P51808 116 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 KDM4DQ6B0I6 523 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 LHFPL2Q6ZUX7 228 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 FAM58AQ8N1B3 248 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 ZNF596Q8TC21 504 aa13.25□□□□□ -0.29
DDR1-229ENST00000396342 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 LOC107986453A0A1B0GWG9 222 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 DAPL1A0PJW8 107 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 TOR1AO14656 332 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 PIN1P1O15428 100 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 CHST1O43916 411 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 RAB13P51153 203 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 UBE2V2Q15819 145 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 FBLN7Q53RD9 439 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 C16orf82Q7Z2V1 217 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 RTN4RL2Q86UN3 420 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 TMEM219Q86XT9 240 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 SPSB1Q96BD6 273 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 CPNE2Q96FN4 548 aaPredicted RBP13.24□□□□□ -0.29
DDR1-229ENST00000396342 OR5M11Q96RB7 305 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 GABARAPL1Q9H0R8 117 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 TMEM133Q9H2Q1 129 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
DDR1-229ENST00000396342 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
DDR1-229ENST00000396342 MTCH1Q9NZJ7 389 aa13.24□□□□□ -0.29
DDR1-229ENST00000396342 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
DDR1-229ENST00000396342 A6NDX4 124 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 ODF3BA8MYP8 253 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 G3V4G9 280 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 PF4V1P10720 104 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 PAX6P26367 422 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 PRRX1P54821 245 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 Q6ZSR3 168 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
DDR1-229ENST00000396342 C11orf42Q8N5U0 333 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 TRUB1Q8WWH5 349 aaKnown RBP13.23□□□□□ -0.29
DDR1-229ENST00000396342 SLC7A6OSQ96CW6 309 aaPredicted RBP13.23□□□□□ -0.29
DDR1-229ENST00000396342 CIB1Q99828 191 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 ZNF702PQ9H963 129 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
DDR1-229ENST00000396342 WNK1Q9H4A3 2382 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 IGHV2-26A0A0B4J1V2 119 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 TRBV2A0A0J9YWF9 115 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 MEX3AA1L020 520 aaKnown RBP13.22□□□□□ -0.29
DDR1-229ENST00000396342 LEUTXA8MZ59 168 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 DYNC1I1O14576 645 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 ZNF737O75373 536 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 HTR1AP08908 422 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 ATF1P18846 271 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 CD33P20138 364 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 ERP29P30040 261 aaKnown RBP13.22□□□□□ -0.29
DDR1-229ENST00000396342 MNDAP41218 407 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 SNU13P55769 128 aaKnown RBP13.22□□□□□ -0.29
DDR1-229ENST00000396342 P2RX3P56373 397 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 EFNB1P98172 346 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 SCN1BQ07699 218 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 CCDC144NLQ6NUI1 221 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 CRIP3Q6Q6R5 217 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 LYG1Q8N1E2 194 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 Q8N2B8 174 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
DDR1-229ENST00000396342 CHST6Q9GZX3 395 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
DDR1-229ENST00000396342 NOTCH1P46531 2555 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 MAGEB3O15480 346 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 APOL3O95236 402 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 PF4P02776 101 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 CD28P10747 220 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 ZNF44P15621 663 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 DLX6P56179 175 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 BNIP1Q12981 228 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 BEAN1Q3B7T3 259 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 TP53I3Q53FA7 332 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 MEDAGQ5VYS4 303 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 UTS2BQ765I0 119 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 C10orf67Q8IYJ2 551 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 ABHD12Q8N2K0 398 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 PIFOQ8TCI5 191 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 MRAPQ8TCY5 172 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 FGGYQ96C11 551 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 OPALINQ96PE5 141 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 NECAP2Q9NVZ3 263 aa13.21□□□□□ -0.29
DDR1-229ENST00000396342 M0QZK8 103 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms