RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 GDNFP39905 211 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OR3A1P47881 315 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 MTCP1P56278 107 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 TMED1Q13445 227 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 IL18R1Q13478 541 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ALKBH1Q13686 389 aaKnown RBP9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 HABP2Q14520 560 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 CNN3Q15417 329 aaKnown RBP9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ASPHD2Q6ICH7 369 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ZBTB49Q6ZSB9 765 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 TMEM219Q86XT9 240 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ZNF676Q8N7Q3 588 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ZSCAN4Q8NAM6 433 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 BEND2Q8NDZ0 799 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OR51A2Q8NGJ7 313 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OR5D13Q8NGL4 314 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OR13C5Q8NGS8 318 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 RHOXF1Q8NHV9 184 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 CYYR1Q96J86 154 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OPALINQ96PE5 141 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 C9orf16Q9BUW7 83 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ZNF696Q9H7X3 374 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 FAM118AQ9NWS6 357 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ERVK13-1Q9NX77 482 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 FOXJ3Q9UPW0 622 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 GSTK1Q9Y2Q3 226 aa9.41□□□□□ -0.9
HLA-DQA1-203ENST00000395363 LOC100130705A0A1B0GUX0 176 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ZFPL1O95159 310 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ARG1P05089 322 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 LIMS3P0CW19 117 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 LIMS4P0CW20 117 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 SOX2P48431 317 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 RBP2P50120 134 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ETV1P50549 477 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ATP1B3P54709 279 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ACTC1P68032 377 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ACTA1P68133 377 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 SCN1BQ07699 218 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 DOC2BQ14184 412 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 GALEQ14376 348 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 GRK1Q15835 563 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 ZSCAN26Q16670 478 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 SLC25A30Q5SVS4 291 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 PRAMEF5Q5TYX0 476 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OR2G6Q5TZ20 316 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 TMEM244Q5VVB8 128 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 FDX2Q6P4F2 183 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 CCBE1Q6UXH8 406 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 GDPD3Q7L5L3 318 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 OR8H2Q8N162 312 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 FAM58AQ8N1B3 248 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 LYG1Q8N1E2 194 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 PIFOQ8TCI5 191 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 TRUB1Q8WWH5 349 aaKnown RBP9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 NEK6Q9HC98 313 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 HHLA2Q9UM44 414 aa9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 SF3B6Q9Y3B4 125 aaKnown RBP9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 SIRT4Q9Y6E7 314 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQA1-203ENST00000395363 TRBV2A0A0J9YWF9 115 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 C17orf98A8MV24 154 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ODF3BA8MYP8 253 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 EBAG9O00559 213 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 HSPB6O14558 160 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 OR2H2O95918 312 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 LALBAP00709 142 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 PEX2P28328 305 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ACSM1Q08AH1 577 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 PDZK1IP1Q13113 114 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 DYNC1I2Q13409 638 aaKnown RBP9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 FAM189A2Q15884 450 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 LRRC75BQ2VPJ9 315 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 TMEM95Q3KNT9 176 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 MEDAGQ5VYS4 303 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 GDPGP1Q6ZNW5 385 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 Q6ZS46 218 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ZFP41Q8N8Y5 198 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 OR10K1Q8NGX5 313 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 TSEN15Q8WW01 171 aaKnown RBP9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 PP6455Q8WZ26 134 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 CAB39Q9Y376 341 aaPredicted RBP9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 HILPDAQ9Y5L2 63 aa9.39□□□□□ -0.91
HLA-DQA1-203ENST00000395363 SERPINA3P01011 423 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 IGHV3-7P01780 117 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ISG15P05161 165 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 CHRM2P08172 466 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 HCKP08631 526 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 IGHV1-8P0DP01 117 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 CD24P25063 80 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 GLIPR1P48060 266 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ZP1P60852 638 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 ATXN7L3Q14CW9 347 aaPredicted RBP9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 SSX2Q16385 188 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 MIDNQ504T8 468 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 LHFPL2Q6ZUX7 228 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 UTS2BQ765I0 119 aa9.38□□□□□ -0.91
HLA-DQA1-203ENST00000395363 TRAPPC6BQ86SZ2 158 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms