RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OR14J1Q9UGF5 321 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 A0A1W2PPQ1 181 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 TK1P04183 234 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 MSX1P28360 303 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SLC35A1P78382 337 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF774Q6NX45 483 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 TCEAL7Q9BRU2 100 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 PECRQ9BY49 303 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 OPA3Q9H6K4 179 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 IGKV1D-8A0A087WSZ0 117 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 E5RGE8 158 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 MS4A18H0YCH9 400 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 AP4M1O00189 453 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SCGB1D1O95968 90 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 DCAF7P61962 342 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 TGFBR3Q03167 851 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SSX2Q16385 188 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 C21orf62-AS1Q17RA5 79 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 MS4A18Q3C1V0 323 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 SPINK9Q5DT21 86 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF684Q5T5D7 378 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 ASPHD2Q6ICH7 369 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 HOGA1Q86XE5 327 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 OR5L2Q8NGL0 311 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 NECAP2Q9NVZ3 263 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 NSG2Q9Y328 171 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 WSB1Q9Y6I7 421 aa11.59□□□□□ -0.55
NFKB1-202ENST00000394820 TSTD3H0UI37 97 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.55
NFKB1-202ENST00000394820 GPR137BO60478 399 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 CD8AP01732 235 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 CD63P08962 238 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF813Q6ZN06 617 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 GJC3Q8NFK1 279 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 ASB10Q8WXI3 467 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 AQP3Q92482 292 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 ZNF501Q96CX3 271 aaPredicted RBP11.58□□□□□ -0.55
NFKB1-202ENST00000394820 PRDM6Q9NQX0 595 aa11.58□□□□□ -0.55
NFKB1-202ENST00000394820 TP53I11O14683 189 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 TSPAN2O60636 221 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 ZFAND5O76080 213 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 TRGC2P03986 189 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 B2MP61769 119 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 ARF1P84077 181 aaKnown RBP11.58□□□□□ -0.56
NFKB1-202ENST00000394820 DHODHQ02127 395 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 SSBP1Q04837 148 aaKnown RBP11.58□□□□□ -0.56
NFKB1-202ENST00000394820 RNF212Q495C1 297 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 C5orf46Q6UWT4 87 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 HLA-CQ95604 372 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 RBMXL1Q96E39 390 aaKnown RBP11.58□□□□□ -0.56
NFKB1-202ENST00000394820 SHDQ96IW2 340 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 TNFSF11O14788 317 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 ADAM20O43506 726 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 KLK3P07288 261 aaPredicted RBP11.58□□□□□ -0.56
NFKB1-202ENST00000394820 HKR1P10072 659 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 ZNF708P17019 499 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 ZNF154Q13106 437 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 FNDC7Q5VTL7 733 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 MCEMP1Q8IX19 187 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 ADAM19Q9H013 955 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 SIT1Q9Y3P8 196 aa11.58□□□□□ -0.56
NFKB1-202ENST00000394820 NKX2-6A6NCS4 301 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 PATE3B3GLJ2 98 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 TUSC2O75896 110 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 HABP2Q14520 560 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 THEM4Q5T1C6 240 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 AADACL3Q5VUY0 350 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 LYSMD4Q5XG99 296 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 D2HGDHQ8N465 521 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 CCDC71LQ8N9Z2 235 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 OR1K1Q8NGR3 316 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 RNF133Q8WVZ7 376 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 ZNF385AQ96PM9 386 aaKnown RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 OR5B12Q96R08 314 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 CABLES2Q9BTV7 478 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 NMES1Q9C002 83 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 CLN5O75503 358 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 DCDP81605 110 aaKnown RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 SPATA46Q5T0L3 261 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 WDR25Q64LD2 544 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 LURAP1Q96LR2 239 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 OCIAD1Q9NX40 245 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 CD300LBA8K4G0 201 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 IGHV3-13P01766 116 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 IGHV3-7P01780 117 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 MSR1P21757 451 aa11.57□□□□□ -0.56
NFKB1-202ENST00000394820 APOBEC1P41238 236 aaKnown RBP11.57□□□□□ -0.56
NFKB1-202ENST00000394820 RBP2P50120 134 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms