RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 OR56B2PQ8NGI1 322 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 DNAJC13O75165 2243 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 C5orf49A4QMS7 147 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A10PA6NDY2 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A18PA6NE21 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A16PA6NEW6 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A20PA6NIJ5 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A8PA6NJQ4 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A7PA6NKC0 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A22PA8MWA6 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A12PA8MX19 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A5PA8MXJ8 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A23PA8MXZ1 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 KCNAB3O43448 404 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 CST4P01036 141 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 APOC3P02656 99 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A15PP0C7V4 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A13PP0C7W8 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A14PP0C7W9 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM90A24PP0C7X0 464 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FUT3P21217 361 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FLI1Q01543 452 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 MALLQ13021 153 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 FAM74A1Q5RGS3 127 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 ATRAIDQ6UW56 229 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 SAXO1Q8IYX7 474 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 DNAJB11Q9UBS4 358 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 ZNF175Q9Y473 711 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 PCNX2A6NKB5 2137 aa13.22□□□□□ -0.29
UBE2D3-207ENST00000394801 PRSS44E7EML9 344 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 CD46P15529 392 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 RAB1AP62820 205 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 RBM39Q14498 530 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 ELP2Q6IA86 826 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 SLC25A26Q70HW3 274 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 AQP10Q96PS8 301 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 CYTL1Q9NRR1 136 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 PRELID3BQ9Y3B1 194 aa13.21□□□□□ -0.29
UBE2D3-207ENST00000394801 PET100P0DJ07 73 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 NPBWR2P48146 333 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 SOX8P57073 446 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 BRICD5Q6PL45 260 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 TMEM200AQ86VY9 491 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 SLC30A7Q8NEW0 376 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 KLF2Q9Y5W3 355 aaPredicted RBP13.21□□□□□ -0.3
UBE2D3-207ENST00000394801 TEX46H3BTG2 121 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 HOXB5P09067 269 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 CCNOP22674 350 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 PRDX4Q13162 271 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 RAB32Q13637 225 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 CEACAM21Q3KPI0 293 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 BHLHE23Q8NDY6 225 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 DYRK2Q92630 601 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 GALNT14Q96FL9 552 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 MARS2Q96GW9 593 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 PAPOLGQ9BWT3 736 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 FGF23Q9GZV9 251 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 OPA3Q9H6K4 179 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 ZNF286AQ9HBT8 521 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 CCL2P13500 99 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 UCP3P55916 312 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 UNQ6126/PRO20091Q6UXV3 157 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 MRPL21Q7Z2W9 205 aaKnown RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 DPPA2Q7Z7J5 298 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 MCEMP1Q8IX19 187 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 NAXEQ8NCW5 288 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 HPSE2Q8WWQ2 592 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 FBXO9Q9UK97 447 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 STARD10Q9Y365 291 aa13.2□□□□□ -0.3
UBE2D3-207ENST00000394801 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 ZNF728P0DKX0 622 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 CD79AP11912 226 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 C3AR1Q16581 482 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 SHEQ5VZ18 495 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 Q6ZPA2 131 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 Q6ZS49 121 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 BAP18Q8IXM2 172 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 WDYHV1Q96HA8 205 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 KCNIP3Q9Y2W7 256 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 LIPGQ9Y5X9 500 aa13.19□□□□□ -0.3
UBE2D3-207ENST00000394801 FGF16O43320 207 aa13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 PIGPP57054 158 aa13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 PLP2Q04941 152 aa13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 TRIP6Q15654 476 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 SRSF7Q16629 238 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 SLC22A25Q6T423 547 aa13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 ZDHHC23Q8IYP9 409 aa13.18□□□□□ -0.3
UBE2D3-207ENST00000394801 LRRC46Q96FV0 321 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms