RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 BEX5Q5H9J7 111 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 FAAP20Q6NZ36 180 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 PLET1Q6UQ28 207 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 LINC00596Q86U02 117 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 OR4C16Q8NGL9 310 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 EMG1Q92979 244 aaKnown RBP17.2■□□□□ 0.34
HDDC3-202ENST00000394272 SULT4A1Q9BR01 284 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 OCSTAMPQ9BR26 566 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 DPAGT1Q9H3H5 408 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 RCC2Q9P258 522 aaKnown RBP17.2■□□□□ 0.34
HDDC3-202ENST00000394272 C3orf80F5H4A9 247 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 AKAIN1P0CW23 69 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 FUT3P21217 361 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 SNU13P55769 128 aaKnown RBP17.19■□□□□ 0.34
HDDC3-202ENST00000394272 IL13RA2Q14627 380 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 STEAP1BQ6NZ63 245 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 WDR82Q6UXN9 313 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 ZNF826PQ6ZT77 177 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 POC1AQ8NBT0 407 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 OR4D10Q8NGI6 311 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 FBXW5Q969U6 566 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 UPRTQ96BW1 309 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 FAAP24Q9BTP7 215 aa17.19■□□□□ 0.34
HDDC3-202ENST00000394272 PKDREJQ9NTG1 2253 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 E7EQL1 145 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 CD74P04233 296 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 PRB1P04280 392 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 NAT1P18440 290 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 FAUP35544 74 aaKnown RBP17.18■□□□□ 0.34
HDDC3-202ENST00000394272 CBX5P45973 191 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 NKPD1Q17RQ9 610 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 OR4S1Q8NGB4 309 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 CACNG6Q9BXT2 260 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 HES4Q9HCC6 221 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 IFT46Q9NQC8 304 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 CACNA1DQ01668 2161 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 A6NLC8 198 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 SPRY3O43610 288 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 PMELP40967 661 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 ZNF81P51508 661 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 CCR6P51684 374 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 SNAPC3Q92966 411 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 MEGF10Q96KG7 1140 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 OR2V2Q96R30 315 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 MARVELD1Q9BSK0 173 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 COPZ2Q9P299 210 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 AK3Q9UIJ7 227 aa17.18■□□□□ 0.34
HDDC3-202ENST00000394272 DEFB108AA8MXU0 73 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 ZNF736B4DX44 427 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-202ENST00000394272 TPD52L2O43399 206 aaKnown RBP17.17■□□□□ 0.34
HDDC3-202ENST00000394272 HLA-DMAP28067 261 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 LOXP28300 417 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-202ENST00000394272 SFRP4Q6FHJ7 346 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-202ENST00000394272 BRICD5Q6PL45 260 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 NEUROG1Q92886 237 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 UFSP2Q9NUQ7 469 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 MCUBQ9NWR8 336 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 ZDHHC8Q9ULC8 765 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 RNF115Q9Y4L5 304 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 ABCA4P78363 2273 aa17.17■□□□□ 0.34
HDDC3-202ENST00000394272 FUOMA2VDF0 154 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 VSTM5A8MXK1 200 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 IGHV1-46P01743 117 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 TCRBP04435 133 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 DUSP1P28562 367 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 IKZF1Q13422 519 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 SPRNQ5BIV9 151 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 ATAD3CQ5T2N8 411 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 OR52W1Q6IF63 320 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 CREB3L1Q96BA8 519 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 IFT22Q9H7X7 185 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 NXPH2O95156 264 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 RAB3DO95716 219 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 SERPINF1P36955 418 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 GATA4P43694 442 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 BCAP31P51572 246 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 ZNF146Q15072 292 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 HOGA1Q86XE5 327 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 ZNF843Q8N446 348 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 HDHD3Q9BSH5 251 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-202ENST00000394272 IL19Q9UHD0 177 aa17.16■□□□□ 0.34
HDDC3-202ENST00000394272 H3BUI4 141 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 PLAUP00749 431 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 ADH4P08319 380 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 CFHR2P36980 270 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 Q6P435 159 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 CADM3Q8N126 398 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 DYRK2Q92630 601 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 CMSS1Q9BQ75 279 aaKnown RBP17.15■□□□□ 0.34
HDDC3-202ENST00000394272 TMEM204Q9BSN7 226 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 TINAGL1Q9GZM7 467 aaPredicted RBP17.15■□□□□ 0.34
HDDC3-202ENST00000394272 SPACA1Q9HBV2 294 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 C1orf123Q9NWV4 160 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 ZNF230Q9UIE0 474 aaPredicted RBP17.15■□□□□ 0.34
HDDC3-202ENST00000394272 NUBP2Q9Y5Y2 271 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 ARFGEF3Q5TH69 2177 aa17.15■□□□□ 0.34
HDDC3-202ENST00000394272 M0QYG6 137 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 ZNF735P0CB33 412 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 OR10Z1Q8NGY1 313 aa17.14■□□□□ 0.33
HDDC3-202ENST00000394272 OR56B4Q8NH76 319 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms