RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 BATF2Q8N1L9 274 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 ZNF676Q8N7Q3 588 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 YIPF7Q8N8F6 280 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 SGCDQ92629 289 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 PHF21AQ96BD5 680 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 BORCS8Q96FH0 119 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 AKR1E2Q96JD6 320 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 CLEC7AQ9BXN2 247 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 UBE2J1Q9Y385 318 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 TRBV2A0A0J9YWF9 115 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 MGST3O14880 152 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 HAND1O96004 215 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 HTR1DP28221 377 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 EPHA2P29317 976 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 HTR1FP30939 366 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 CDC42P60953 191 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 ZNF91Q05481 1191 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 TMED1Q13445 227 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 SPIN3Q5JUX0 258 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 OR52W1Q6IF63 320 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 SSX6Q7RTT6 188 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 RTN4RL2Q86UN3 420 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 SLAMF9Q96A28 289 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 ADI1Q9BV57 179 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 LIN7BQ9HAP6 207 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 HILPDAQ9Y5L2 63 aa14.03□□□□□ -0.16
SNRPA1-202ENST00000394082 A0A1W2PQL4 384 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 G3V2T6 193 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 RPP14O95059 124 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 UBCP0CG48 685 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 RBP2P50120 134 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 ISL1P61371 349 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 SLC34A1Q06495 639 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 EDDM3AQ14507 147 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 GRK1Q15835 563 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 ATP6AP1Q15904 470 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 Q6ZS46 218 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 OR5AU1Q8NGC0 362 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 OR52N4Q8NGI2 321 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 OR4P4Q8NGL7 312 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 EMG1Q92979 244 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 SLC7A6OSQ96CW6 309 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 IL4I1Q96RQ9 567 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 GABARAPL1Q9H0R8 117 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 GLS2Q9UI32 602 aa14.02□□□□□ -0.17
SNRPA1-202ENST00000394082 M0R129 80 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 PSPNO60542 156 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 CYB5AP00167 134 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 IGHA1P01876 353 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 BRS3P32247 399 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 ARHGDIBP52566 201 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 ATP1B3P54709 279 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 BDH1Q02338 343 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 ARSJQ5FYB0 599 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 UTS2BQ765I0 119 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 ZDHHC13Q8IUH4 622 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 FAM58AQ8N1B3 248 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 NDNFQ8TB73 568 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 ZNF596Q8TC21 504 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 CORO2AQ92828 525 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 CREB3L1Q96BA8 519 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 GAL3ST2Q9H3Q3 398 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 RHOFQ9HBH0 211 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 TAS2R3Q9NYW6 316 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 DPM3Q9P2X0 92 aa14.01□□□□□ -0.17
SNRPA1-202ENST00000394082 FUOMA2VDF0 154 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 MITFO75030 526 aaPredicted RBP14□□□□□ -0.17
SNRPA1-202ENST00000394082 ENTPD6O75354 484 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 ISG15P05161 165 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 CD33P20138 364 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 PRKACBP22694 351 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 GABRR1P24046 479 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 CD34P28906 385 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 P2RX3P56373 397 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 ODF4Q2M2E3 257 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 FOXB2Q5VYV0 432 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 HEPN1Q6WQI6 88 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 PRSS35Q8N3Z0 413 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 OR8J1Q8NGP2 316 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 SPSB1Q96BD6 273 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 OR5M11Q96RB7 305 aa14□□□□□ -0.17
SNRPA1-202ENST00000394082 LOC107986453A0A1B0GWG9 222 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 MEX3AA1L020 520 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 DUS4LO95620 317 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 IGLV1-47P01700 117 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 LMO1P25800 156 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 OR3A1P47881 315 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 NPBWR2P48146 333 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 TMEM244Q5VVB8 128 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 LHFPL2Q6ZUX7 228 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 KCTD20Q7Z5Y7 419 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 ABHD12Q8N2K0 398 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 RFKQ969G6 155 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 TBX5Q99593 518 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 CHST6Q9GZX3 395 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 HMG20AQ9NP66 347 aa13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 RBFOX1Q9NWB1 397 aaKnown RBP13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 TSSC4Q9Y5U2 329 aaPredicted RBP13.99□□□□□ -0.17
SNRPA1-202ENST00000394082 TRGV10A0A0A0MS01 117 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms