RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 TRAPPC6BQ86SZ2 158 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 WDR86Q86TI4 376 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 MUC15Q8N387 334 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 MRPS24Q96EL2 167 aaKnown RBP11.5□□□□□ -0.57
PTN-202ENST00000393083 OR51I2Q9H344 312 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 FAIMQ9NVQ4 179 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 NKIRAS2Q9NYR9 191 aa11.5□□□□□ -0.57
PTN-202ENST00000393083 TMEM210A6NLX4 147 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 MT-ND4P03905 459 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 MELTFP08582 738 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 CSF1P09603 554 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 OR4A8P0C604 315 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 BTCP35070 178 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 RBM11P57052 281 aaKnown RBP11.49□□□□□ -0.57
PTN-202ENST00000393083 IL24Q13007 206 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 TAF9Q16594 264 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 PNLIPRP3Q17RR3 467 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 SWI5Q1ZZU3 235 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 AGAP6Q5VW22 663 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 Q6ZR03 302 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 GLCCI1Q86VQ1 547 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 LRP11Q86VZ4 500 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 FBXL14Q8N1E6 418 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 CELF2-AS1Q8N7Q2 184 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 SYT3Q9BQG1 590 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 PECRQ9BY49 303 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 CXXC4Q9H2H0 198 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 MSL2Q9HCI7 577 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 CBLN4Q9NTU7 201 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 BEX4Q9NWD9 120 aaPredicted RBP11.49□□□□□ -0.57
PTN-202ENST00000393083 TAS2R8Q9NYW2 309 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 DUSP13Q9UII6 198 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 MAST4O15021 2626 aa11.49□□□□□ -0.57
PTN-202ENST00000393083 IGHV3-13P01766 116 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 FCER2P06734 321 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 PAX1P15863 534 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 MPZP25189 248 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 RCVRNP35243 200 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 SERPINF1P36955 418 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 FGF12P61328 243 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 ZNF154Q13106 437 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 EFNB3Q15768 340 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 NKAPLQ5M9Q1 402 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 OLFML2AQ68BL7 652 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 OR13G1Q8NGZ3 307 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 MMP28Q9H239 520 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 HRASLSQ9HDD0 168 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTN-202ENST00000393083 ZNF701Q9NV72 531 aaPredicted RBP11.48□□□□□ -0.57
PTN-202ENST00000393083 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 NLKQ9UBE8 527 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 ST3GAL6Q9Y274 331 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 CCDC168Q8NDH2 2452 aa11.48□□□□□ -0.57
PTN-202ENST00000393083 F5H5P2 479 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 GEMIN2O14893 280 aaKnown RBP11.47□□□□□ -0.57
PTN-202ENST00000393083 AKR7A2O43488 359 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 SSX5O60225 188 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 GRPP07492 148 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 FAUP35544 74 aaKnown RBP11.47□□□□□ -0.57
PTN-202ENST00000393083 SNU13P55769 128 aaKnown RBP11.47□□□□□ -0.57
PTN-202ENST00000393083 ARFRP1Q13795 201 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 ARL6IP1Q15041 203 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 ELP2Q6IA86 826 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 SPERTQ8NA61 448 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 Q8NFD4 153 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 GTF3AQ92664 365 aaKnown RBP11.47□□□□□ -0.57
PTN-202ENST00000393083 CYYR1Q96J86 154 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 FOXC2Q99958 501 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 DPAGT1Q9H3H5 408 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 IFT46Q9NQC8 304 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 KCNK7Q9Y2U2 307 aa11.47□□□□□ -0.57
PTN-202ENST00000393083 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 IGHV3-64DA0A0J9YX35 117 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 A0A1B0GWJ7 208 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 NAP1L6A6NFF2 107 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 SERPINE3A8MV23 424 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 F8VVB4 439 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 F8VWA3 439 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 RHBDL1O75783 438 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 PRKACAP17612 351 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 CHATP28329 748 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 SLC6A1P30531 599 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 TAS2R19P59542 299 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 SELENOVP59797 346 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 MZT1Q08AG7 82 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 TESK1Q15569 626 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 FAM76BQ5HYJ3 339 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 SIGIRRQ6IA17 410 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 FAAP20Q6NZ36 180 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 PLET1Q6UQ28 207 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 C6orf201Q7Z4U5 140 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 DUSP18Q8NEJ0 188 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 OR4C16Q8NGL9 310 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 ST8SIA4Q92187 359 aa11.46□□□□□ -0.57
PTN-202ENST00000393083 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.57
PTN-202ENST00000393083 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms