RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 ATG101Q9BSB4 218 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 APOOQ9BUR5 198 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 ST6GALNAC5Q9BVH7 336 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 REPIN1Q9BWE0 567 aaKnown RBP4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 NKX2-4Q9H2Z4 354 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 CHODLQ9H9P2 273 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 CALHM2Q9HA72 323 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 CAPN10Q9HC96 672 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 PARD6AQ9NPB6 346 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 ASCL3Q9NQ33 180 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 GPR173Q9NS66 373 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 NECAP2Q9NVZ3 263 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 FKBP11Q9NYL4 201 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 TBC1D29Q9UFV1 150 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 NAGKQ9UJ70 344 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 ANXA10Q9UJ72 324 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 SLC7A11Q9UPY5 501 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 POLR3KQ9Y2Y1 108 aaPredicted RBP4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 TMEM56-RWDD3S4R434 201 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 ATG2AQ2TAZ0 1938 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 ATG2BQ96BY7 2078 aa4.34□□□□□ -1.71
TRAJ4-201ENST00000390533 RTTNQ86VV8 2226 aa4.34□□□□□ -1.72
TRAJ4-201ENST00000390533 LOC101059948A0A1B0GTJ6 334 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 A0A1W2PN81 502 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 A0A1W2PNV4 684 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 PRSS38A1L453 326 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 MAP1LC3B2A6NCE7 125 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 FAM24AA6NFZ4 105 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 DHRS7CA6NNS2 312 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 PROB1E7EW31 1015 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 NPIPA5E9PKD4 350 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 TGFBR3LH3BV60 316 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 K7EP13 123 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 MSTNO14793 375 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CCL16O15467 120 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 XRCC2O43543 280 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 YPEL1O60688 119 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 VENTXO95231 258 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 AHSA1O95433 338 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 SYNGR4O95473 234 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 DIRAS3O95661 229 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 SEMA4FO95754 770 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 HPRT1P00492 218 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 HRASP01112 189 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 IL6RP08887 468 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 WNT2P09544 360 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 HNRNPA1P09651 372 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 NPSP0C0P6 89 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CD99P14209 185 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 BRS3P32247 399 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CHRNA7P36544 502 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 IDH3GP51553 393 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 SUMO3P55854 103 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ZNF121P58317 390 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 RAB11AP62491 216 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 GRB2P62993 217 aaKnown RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 PAFAH1B2P68402 229 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ID3Q02535 119 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ZNF92Q03936 586 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 RNPS1Q15287 305 aaKnown RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CST6Q15828 149 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 EXT1Q16394 746 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 C4orf17Q53FE4 359 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ARSJQ5FYB0 599 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 COL5A1-AS1Q5SY13 56 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 WDR25Q64LD2 544 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ARMC6Q6NXE6 501 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CNKSR3Q6P9H4 555 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 POMZP3Q6PJE2 187 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 OGFOD3Q6PK18 319 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CRIP3Q6Q6R5 217 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 CHRDL2Q6WN34 429 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ASCL4Q6XD76 172 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ZNF66Q6ZN08 573 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 Q6ZS49 121 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 H1FNTQ75WM6 255 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 RTN4RL2Q86UN3 420 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 LSRQ86X29 649 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ZNF761Q86XN6 746 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 THNSL2Q86YJ6 484 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 MRPL41Q8IXM3 137 aaKnown RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ZNF100Q8IYN0 542 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 TMEFF1Q8IYR6 380 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ZFP62Q8NB50 900 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 OR52M1Q8NGK5 317 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 OR10S1Q8NGN2 331 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 OR14C36Q8NHC7 312 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ORAOV1Q8WV07 137 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 KCNE4Q8WWG9 221 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 PP6455Q8WZ26 134 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 C11orf40Q8WZ69 217 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 PINX1Q96BK5 328 aaKnown RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 Q96M66 194 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 YPEL2Q96QA6 119 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 ABHD14AQ9BUJ0 271 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 MAP1LC3BQ9GZQ8 125 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 GSX1Q9H4S2 264 aaPredicted RBP4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 BANF2Q9H503 90 aa4.33□□□□□ -1.72
TRAJ4-201ENST00000390533 LPAR2Q9HBW0 351 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms