RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 PRO3102Q9H379 93 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 LHFPL6Q9Y693 200 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 IGKV1D-8A0A087WSZ0 117 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 BORCS7-ASMTA0A0B4J1R7 106 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 MBPP02686 304 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 CHRM2P08172 466 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 BTF3P20290 206 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 CLRN1P58418 232 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 UBE2V2Q15819 145 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 COMMD1Q8N668 190 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 OR2M3Q8NG83 312 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 RNF138Q8WVD3 245 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 CPNE4Q96A23 557 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 POLR1DQ9Y2S0 133 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 CEACAM18A8MTB9 384 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 PHOX2AO14813 284 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 RER1O15258 196 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 IFNA21P01568 189 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 SEC11BP0C7V7 166 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 MDKP21741 143 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 MMP16P51512 607 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 CHRFAM7AQ494W8 412 aa15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 SPACA9Q96E40 222 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 FAM71F1Q96KD3 344 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-202ENST00000389805 FIGNL2A6NMB9 653 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 GSTP1P09211 210 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 PNLIPP16233 465 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 PKIAP61925 76 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 OR51T1Q8NGJ9 327 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF319Q9P2F9 582 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 OR5H15A6NDH6 313 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 OR5H1A6NKK0 313 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 CCL4P13236 92 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 UCP2P55851 309 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 DLK1P80370 383 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 TSPO2Q5TGU0 170 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 EMG1Q92979 244 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF2Q9BSG1 426 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 KLHL13Q9P2N7 655 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 PILRBQ9UKJ0 227 aa15.43■□□□□ 0.06
SQSTM1-202ENST00000389805 TRAF3IP2O43734 574 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 PGA4P0DJD7 388 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 PGA3P0DJD8 388 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 MAS1LP35410 378 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 MRPL14Q6P1L8 145 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 KLHL24Q6TFL4 600 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 ZFP62Q8NB50 900 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 OR10AD1Q8NGE0 317 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 IFI44Q8TCB0 444 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 NCOA6Q14686 2063 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 ETV2O00321 342 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 SCGNO76038 276 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 TRGC1P0CF51 173 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 ABHD12BQ7Z5M8 362 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 SULF2Q8IWU5 870 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 TOMM40LQ969M1 308 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 C1orf147Q96MC9 270 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 WASF3Q9UPY6 502 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 CHCHD2Q9Y6H1 151 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 CHAF1BQ13112 559 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 DEGS2Q6QHC5 323 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 BEND4Q6ZU67 534 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 SGPP2Q8IWX5 399 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 FRZBQ92765 325 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF700Q9H0M5 742 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 LIPGQ9Y5X9 500 aa15.42■□□□□ 0.06
SQSTM1-202ENST00000389805 IGHV3-15A0A0B4J1V0 119 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 C5orf63A6NC05 138 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 TCAPO15273 167 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 JMJD7P0C870 316 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 MSX1P28360 303 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 BLVRBP30043 206 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 P2RY1P47900 373 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 RSPO4Q2I0M5 234 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 THEM4Q5T1C6 240 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 P4HA3Q7Z4N8 544 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 C1QL2Q7Z5L3 287 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 KCNG3Q8TAE7 436 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 ATG101Q9BSB4 218 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 HDHD3Q9BSH5 251 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 A0A1W2PNV4 684 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 NPIPB13A6NJU9 1138 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 NPIPB4C9JG80 1138 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 DKK1O94907 266 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 IGHG1P01857 330 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 SLC25A53Q5H9E4 307 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 PMS2CLQ68D20 193 aa15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 ELL3Q9HB65 397 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF43P17038 809 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 PCOLCEQ15113 449 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 AKR1C8PQ5T2L2 129 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 LYZL2Q7Z4W2 148 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 OR5AS1Q8N127 324 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 NOXO1Q8NFA2 376 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 ABHD5Q8WTS1 349 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 PACRGQ96M98 296 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 GINS3Q9BRX5 216 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 UNKLQ9H9P5 680 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 PLEKHA2Q9HB19 425 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 FAM86C1Q9NVL1 165 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms