RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 IGLV1-44P01699 117 aa21.56■■□□□ 1.04
SHOX2-201ENST00000389589 NPY4RP50391 375 aa21.56■■□□□ 1.04
SHOX2-201ENST00000389589 SNRPD2P62316 118 aaKnown RBP21.56■■□□□ 1.04
SHOX2-201ENST00000389589 TMEM211Q6ICI0 200 aa21.56■■□□□ 1.04
SHOX2-201ENST00000389589 ADAD2Q8NCV1 583 aaKnown RBP21.56■■□□□ 1.04
SHOX2-201ENST00000389589 OR51I2Q9H344 312 aa21.56■■□□□ 1.04
SHOX2-201ENST00000389589 ZNF442Q9H7R0 627 aa21.56■■□□□ 1.04
SHOX2-201ENST00000389589 RHOFQ9HBH0 211 aa21.56■■□□□ 1.04
SHOX2-201ENST00000389589 IGKV1D-8A0A087WSZ0 117 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 AKR1C4P17516 323 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 NDUFA5Q16718 116 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 AADACL3Q5VUY0 350 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 MITD1Q8WV92 249 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 PHB2Q99623 299 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 C12orf4Q9NQ89 552 aa21.55■■□□□ 1.04
SHOX2-201ENST00000389589 MSTNO14793 375 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 SYNGR1O43759 233 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 SIX6O95475 246 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 DAZAP2Q15038 168 aaPredicted RBP21.54■■□□□ 1.04
SHOX2-201ENST00000389589 TMEM128Q5BJH2 165 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 GRPEL2Q8TAA5 225 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 SFXN3Q9BWM7 321 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 TMPRSS13Q9BYE2 586 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 J3QT63 122 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 CECR9P0C854 216 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 ERVS71-1P61550 626 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 DHODHQ02127 395 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 BRICD5Q6PL45 260 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 C1orf174Q8IYL3 243 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 C5orf66Q9H5L9 145 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 NECAP2Q9NVZ3 263 aa21.54■■□□□ 1.04
SHOX2-201ENST00000389589 ANKRD11Q6UB99 2663 aaPredicted RBP21.53■■□□□ 1.04
SHOX2-201ENST00000389589 DUS4LO95620 317 aaKnown RBP21.53■■□□□ 1.04
SHOX2-201ENST00000389589 CEACAM8P31997 349 aaPredicted RBP21.53■■□□□ 1.04
SHOX2-201ENST00000389589 LIN54Q6MZP7 749 aa21.53■■□□□ 1.04
SHOX2-201ENST00000389589 BATF2Q8N1L9 274 aa21.53■■□□□ 1.04
SHOX2-201ENST00000389589 BCL2L14Q9BZR8 327 aa21.53■■□□□ 1.04
SHOX2-201ENST00000389589 ZNF286AQ9HBT8 521 aa21.53■■□□□ 1.04
SHOX2-201ENST00000389589 RCC2Q9P258 522 aaKnown RBP21.53■■□□□ 1.04
SHOX2-201ENST00000389589 LRP5LA4QPB2 252 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 F8VVB4 439 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 F8VWA3 439 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 HLA-GP17693 338 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 VAMP1P23763 118 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 PSG7Q13046 419 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 PDCD1Q15116 288 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 OR5M8Q8NGP6 311 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 KLF14Q8TD94 323 aaPredicted RBP21.52■■□□□ 1.04
SHOX2-201ENST00000389589 MARS2Q96GW9 593 aaKnown RBP21.52■■□□□ 1.04
SHOX2-201ENST00000389589 OPRM1P35372 400 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 FAM76BQ5HYJ3 339 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 DCAF12L2Q5VW00 463 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 DYRK2Q92630 601 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 SPACA1Q9HBV2 294 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 SLC25A15Q9Y619 301 aa21.52■■□□□ 1.04
SHOX2-201ENST00000389589 IL13RA2Q14627 380 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 LGALSLQ3ZCW2 172 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-201ENST00000389589 RPRMLQ8N4K4 120 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 EXTL1Q92935 676 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 ADAT1Q9BUB4 502 aaKnown RBP21.51■■□□□ 1.03
SHOX2-201ENST00000389589 OR5H14A6NHG9 310 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 OR5H8P0DN80 308 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 PPP3CBP16298 524 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 PRKACAP17612 351 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 LY6G6FQ5SQ64 297 aa21.51■■□□□ 1.03
SHOX2-201ENST00000389589 ZNF2Q9BSG1 426 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-201ENST00000389589 RTBDNQ9BSG5 229 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-201ENST00000389589 IGHV1-18A0A0C4DH31 117 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 CALCRP30988 508 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 TDGF1P3P51864 188 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 SRSF4Q08170 494 aaKnown RBP21.5■■□□□ 1.03
SHOX2-201ENST00000389589 TIMM23BQ5SRD1 257 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 ZNF474Q6S9Z5 364 aaPredicted RBP21.5■■□□□ 1.03
SHOX2-201ENST00000389589 FAM58AQ8N1B3 248 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 DHRS9Q9BPW9 319 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 POLDIP2Q9Y2S7 368 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 MGAQ8IWI9 3026 aa21.5■■□□□ 1.03
SHOX2-201ENST00000389589 PLSCR5A0PG75 271 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 SRSF7Q16629 238 aaKnown RBP eCLIP21.49■■□□□ 1.03
SHOX2-201ENST00000389589 DHRS11Q6UWP2 260 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 Q8IYB0 196 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 Q8NA96 180 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 TMEM230Q96A57 120 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 WDR89Q96FK6 387 aaPredicted RBP21.49■■□□□ 1.03
SHOX2-201ENST00000389589 HS3ST6Q96QI5 342 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 DECR2Q9NUI1 292 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 C14orf166Q9Y224 244 aaKnown RBP21.49■■□□□ 1.03
SHOX2-201ENST00000389589 HEATR1Q9H583 2144 aaKnown RBP21.49■■□□□ 1.03
SHOX2-201ENST00000389589 IGHV2OR16-5A0A0B4J2B6 119 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 TMEM210A6NLX4 147 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 PRRG2O14669 202 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 C4BPBP20851 252 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 MPV17P39210 176 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 GMFBP60983 142 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 IKZF1Q13422 519 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 ZNF660Q6AZW8 331 aaPredicted RBP21.49■■□□□ 1.03
SHOX2-201ENST00000389589 Q6ZS49 121 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 CASTOR1Q8WTX7 329 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 SLX1AQ9BQ83 275 aa21.49■■□□□ 1.03
SHOX2-201ENST00000389589 PURGQ9UJV8 347 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms