RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 TMEM187Q14656 261 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 CDCP2Q5VXM1 449 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 GGNBP1Q5YKI7 109 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 ADAMTS17Q8TE56 1095 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 ARL11Q969Q4 196 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
SCFD2-201ENST00000388940 LRRC46Q96FV0 321 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 REPIN1Q9BWE0 567 aaKnown RBP12.92□□□□□ -0.34
SCFD2-201ENST00000388940 SUCNR1Q9BXA5 334 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 ARRDC1-AS1Q9H2J1 176 aa12.92□□□□□ -0.34
SCFD2-201ENST00000388940 TMEM218A2RU14 115 aa12.91□□□□□ -0.34
SCFD2-201ENST00000388940 DEDDO75618 318 aa12.91□□□□□ -0.34
SCFD2-201ENST00000388940 EIF5AL1Q6IS14 154 aaKnown RBP12.91□□□□□ -0.34
SCFD2-201ENST00000388940 TMEM200AQ86VY9 491 aa12.91□□□□□ -0.34
SCFD2-201ENST00000388940 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
SCFD2-201ENST00000388940 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
SCFD2-201ENST00000388940 FOXJ2Q9P0K8 574 aa12.91□□□□□ -0.34
SCFD2-201ENST00000388940 ZNF724A8MTY0 619 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SYNGR4O95473 234 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SPEM2Q0P670 501 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 TSC22D1Q15714 1073 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 ABCA11PQ4W5N1 156 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SLC22A25Q6T423 547 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 IL34Q6ZMJ4 242 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 CALHM1Q8IU99 346 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SAXO1Q8IYX7 474 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 RTN4IP1Q8WWV3 396 aaPredicted RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 MRPL24Q96A35 216 aaKnown RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 MOB3AQ96BX8 217 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 MMP26Q9NRE1 261 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 PQLC2LA1A4F0 135 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 F8W036 122 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 DNASE2O00115 360 aaPredicted RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 IGHV3-9P01782 118 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 GAPDHP04406 335 aaKnown RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 RPL12P30050 165 aaKnown RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 FCGR2CP31995 323 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 DAZAP2Q15038 168 aaPredicted RBP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCFD2-201ENST00000388940 MST1LQ2TV78 715 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 TMEM164Q5U3C3 297 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 Q6ZS49 121 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 ZNF611Q8N823 705 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 DYRK2Q92630 601 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 SMIM8Q96KF7 97 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 PRRX2Q99811 253 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 STARD10Q9Y365 291 aa12.9□□□□□ -0.34
SCFD2-201ENST00000388940 A0A1W2PNU3 283 aaPredicted RBP12.89□□□□□ -0.35
SCFD2-201ENST00000388940 ATG12O94817 140 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 CST4P01036 141 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 CELA3AP09093 270 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 DEFA5Q01523 94 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 SRYQ05066 204 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF169Q14929 603 aaPredicted RBP12.89□□□□□ -0.35
SCFD2-201ENST00000388940 OR1C1Q15619 314 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 CCDC157Q569K6 752 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 DCAF10Q5QP82 559 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 C10orf91Q5T1B1 145 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 FIP1L1Q6UN15 594 aaKnown RBP12.89□□□□□ -0.35
SCFD2-201ENST00000388940 SLC25A26Q70HW3 274 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 OR5T2Q8NGG2 359 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 TOMM40LQ969M1 308 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 C12orf57Q99622 126 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 SYT3Q9BQG1 590 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 TTTY12Q9BZ98 90 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 PLEKHA2Q9HB19 425 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 WDFY3Q8IZQ1 3526 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 H7C1Q1 480 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 K7EPK0 472 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 ABCD4O14678 606 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
SCFD2-201ENST00000388940 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 FAM71E2Q8N5Q1 922 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 NARS2Q96I59 477 aaKnown RBP12.89□□□□□ -0.35
SCFD2-201ENST00000388940 C18orf12Q96KH6 178 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 TAF9BQ9HBM6 251 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 OR2S2Q9NQN1 319 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
SCFD2-201ENST00000388940 LNP1A1A4G5 178 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 ACTL6AO96019 429 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 OR5AC1P0C628 307 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 GLP1RP43220 463 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 PJVKQ0ZLH3 352 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 RPL7L1Q6DKI1 246 aaKnown RBP12.88□□□□□ -0.35
SCFD2-201ENST00000388940 Q6ZPA2 131 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 APOBEC3DQ96AK3 386 aaPredicted RBP12.88□□□□□ -0.35
SCFD2-201ENST00000388940 LOXL4Q96JB6 756 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 HES7Q9BYE0 225 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 NKX6-2Q9C056 277 aaPredicted RBP12.88□□□□□ -0.35
SCFD2-201ENST00000388940 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms