RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ICAM2P13598 275 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 UGT2B7P16662 529 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SRMP19623 302 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PCMT1P22061 227 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CBLN1P23435 193 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 S100PP25815 95 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 FOXN2P32314 431 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 GCKP35557 465 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 NAMPTP43490 491 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPL29P47914 159 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CSNK1A1P48729 337 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SSR4P51571 173 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 GEMP55040 296 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RAB2AP61019 212 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCZ1BP86790 482 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCZ1P86791 482 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDKL1Q00532 357 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 NUCB1Q02818 461 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 GBE1Q04446 702 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 DMC1Q14565 340 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 KCNJ11Q14654 390 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PPP2R5AQ15172 486 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MAPRE2Q15555 327 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 DEFB133Q30KQ1 61 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCDC40Q4G0X9 1142 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RTL6Q6ICC9 239 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 LPCAT3Q6P1A2 487 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CNSTQ6PJW8 725 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 LPCAT2Q7L5N7 544 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANKRD33Q7Z3H0 272 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MAATS1Q7Z4T9 603 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TSEN54Q7Z6J9 526 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPL52Q86TS9 123 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRIM69Q86WT6 500 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CERS3Q8IU89 383 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 LRRC8AQ8IWT6 810 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 DIS3L2Q8IYB7 885 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 DEFB106AQ8N104 65 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM251Q8N6I4 163 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C8orf31Q8N9H6 132 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 FAM83FQ8NEG4 500 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR8D4Q8NGM9 314 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR2A1Q8NGT9 310 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDC26Q8NHZ8 85 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR5P2Q8WZ92 322 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RAD51AP1Q96B01 352 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCDC51Q96ER9 411 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C11orf24Q96F05 449 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PERPQ96FX8 193 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 ELMO2Q96JJ3 720 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 UBE2E2Q96LR5 201 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C2orf50Q96LR7 162 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF488Q96MN9 340 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RDH12Q96NR8 316 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MARVELD1Q9BSK0 173 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SFXN3Q9BWM7 321 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 HINT2Q9BX68 163 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CACNG6Q9BXT2 260 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TSGA10Q9BZW7 698 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C2orf40Q9H1Z8 148 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR2AG1Q9H205 316 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR52D1Q9H346 318 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TXNIPQ9H3M7 391 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 FGF20Q9NP95 211 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C8orf4Q9NR00 106 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C21orf62Q9NYP8 219 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 AIPL1Q9NZN9 384 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 BFARQ9NZS9 450 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SS18L2Q9UHA2 77 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SMPXQ9UHP9 88 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPR34Q9UPC5 381 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MGAT4BQ9UQ53 548 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 UGT2A1Q9Y4X1 527 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 USP16Q9Y5T5 823 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SPEF2Q9C093 1822 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZMYM4Q5VZL5 1548 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SNAPC4Q5SXM2 1469 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 NRXN2Q9P2S2 1712 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYH10P35580 1976 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CHD5Q8TDI0 1954 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RIMS1Q86UR5 1692 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PASKQ96RG2 1323 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZFYVE16Q7Z3T8 1539 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGLV3-32A0A0A0MS00 114 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRAV8-1A0A0A6YYK1 113 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 LOC107984640A0A0U1RRK4 108 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 C2orf92A0A1B0GVN3 265 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CPSF4LA6NMK7 179 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR2AT4A6NND4 320 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 NCF1CA8MVU1 366 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANKRD65E5RJM6 399 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 K7ENP7 123 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDIPTO14735 213 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CHADO15335 359 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 GATCO43716 136 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZBTB14O43829 449 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 KLHL41O60662 606 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 HMMRO75330 724 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANXA9O76027 345 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 IFNA6P05013 189 aa-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms