RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 HAND1O96004 215 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 EPOP01588 193 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CTSDP07339 412 aaPredicted RBP-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 BPGMP07738 259 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CCND1P24385 295 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CST5P28325 142 aaPredicted RBP-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 KIF5BP33176 963 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR1E2P47887 323 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 PRKXP51817 358 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 MTCP1P56278 107 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 HSD17B7P56937 341 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OSTNP61366 133 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 GALNT1Q10472 559 aaPredicted RBP-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 HSPB3Q12988 150 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 PPP1R1AQ13522 171 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 UBE2V2Q15819 145 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ZNF56Q15929 161 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CCNG2Q16589 344 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 BMP2KLQ5H9B9 411 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 SLX4IPQ5VYV7 408 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ENPP6Q6UWR7 440 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CASC2Q6XLA1 102 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 NIPA1Q7RTP0 329 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 H2BFWTQ7Z2G1 175 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 RANBP3LQ86VV4 465 aaPredicted RBP-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 DHFR2Q86XF0 187 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 TMEM86AQ8N2M4 240 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 LEMD2Q8NC56 503 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 PROKR2Q8NFJ6 384 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR8A1Q8NGG7 326 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 TUBGCP3Q96CW5 907 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 TMEM41AQ96HV5 264 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 UBXN10Q96LJ8 280 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR5B2Q96R09 309 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 PAFAH2Q99487 392 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 SLC39A3Q9BRY0 314 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 THTPAQ9BU02 230 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 UPF3BQ9BZI7 483 aaKnown RBP-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ACTR6Q9GZN1 396 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ZCCHC17Q9NP64 241 aaKnown RBP-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 KIF24Q5T7B8 1368 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 USP34Q70CQ2 3546 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CDC42BPAQ5VT25 1732 aa-3.44□□□□□ -2.96
RNU6-1340P-201ENST00000384438 DOCK1Q14185 1865 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ZNF142P52746 1687 aaPredicted RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ZCCHC6Q5VYS8 1495 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 MSH6P52701 1360 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CNTNAP1P78357 1384 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 FXYD6-FXYD2A0A087WZ82 144 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 FAM237BA0A1B0GVD1 139 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR2AT4A6NND4 320 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 H3BMQ9 156 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 M0R296 226 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 TRDMT1O14717 391 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 STK17BO94768 372 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR2F2O95006 317 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR2C1O95371 312 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CRYGBP07316 175 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 NQO1P15559 274 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CYLC1P35663 651 aaPredicted RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 IFNGR2P38484 337 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CAMPP49913 170 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 SUB1P53999 127 aaKnown RBP eCLIP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 EIF3BP55884 814 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 PPP1CAP62136 330 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 RPS29P62273 56 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 FKBP1BP68106 108 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 IGBP1P78318 339 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 NCF4Q15080 339 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 CLPPQ16740 277 aaPredicted RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 FAM74A1Q5RGS3 127 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR2G6Q5TZ20 316 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 AADACL3Q5VUY0 350 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 PEX26Q7Z412 305 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 SPATA21Q7Z572 469 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 NIT1Q86X76 327 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 LINC00311Q8N616 119 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 WFDC9Q8NEX5 89 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 TSPAN14Q8NG11 270 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR9G4Q8NGQ1 327 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OR1L8Q8NGR8 309 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 RAPGEF5Q92565 580 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 MAL2Q969L2 176 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 C4orf36Q96KX1 117 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 LYSMD1Q96S90 227 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 AMELXQ99217 191 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ATP6V0BQ99437 205 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 SDF2Q99470 211 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 OSBPL8Q9BZF1 889 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 NUP62CLQ9H1M0 184 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 RPF2Q9H7B2 306 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 LIN28AQ9H9Z2 209 aaKnown RBP-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 MCCC2Q9HCC0 563 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 GPR173Q9NS66 373 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 ANKEF1Q9NU02 776 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 TRPM7Q96QT4 1865 aa-3.45□□□□□ -2.96
RNU6-1340P-201ENST00000384438 THSD7AQ9UPZ6 1657 aa-3.46□□□□□ -2.96
RNU6-1340P-201ENST00000384438 GVQW2A0A096LPI5 108 aaPredicted RBP-3.46□□□□□ -2.96
RNU6-1340P-201ENST00000384438 A0A0B4J2A0 478 aa-3.46□□□□□ -2.96
RNU6-1340P-201ENST00000384438 LOC389332A0A1B0GUA5 103 aa-3.46□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms