RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CELP19835 753 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 PRTN3P24158 256 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 CASQ1P31415 396 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 MEF2CQ06413 473 aaPredicted RBP3□□□□□ -1.93
RNU6-40P-201ENST00000384254 BIKQ13323 160 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 CEACAM16Q2WEN9 425 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 CLLU1OSQ5K130 101 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 MRPL2Q5T653 305 aaKnown RBP3□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF773Q6PK81 442 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 TBPL2Q6SJ96 375 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 LINC00596Q86U02 117 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 OR8A1Q8NGG7 326 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 OR6K3Q8NGY3 331 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 TMIGD2Q96BF3 282 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZMYND19Q96E35 227 aaPredicted RBP3□□□□□ -1.93
RNU6-40P-201ENST00000384254 CPB2Q96IY4 423 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 PEBP4Q96S96 227 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 ASB7Q9H672 318 aa3□□□□□ -1.93
RNU6-40P-201ENST00000384254 METTL8Q9H825 291 aaKnown RBP3□□□□□ -1.93
RNU6-40P-201ENST00000384254 DHCR7Q9UBM7 475 aaKnown RBP3□□□□□ -1.93
RNU6-40P-201ENST00000384254 NRCAMQ92823 1304 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 IZUMO1RA6ND01 250 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 RBFOX3A6NFN3 312 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 C16orf90A8MZG2 172 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 OR5AC1P0C628 307 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 SCGB1C2P0DMR2 95 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 MLNP12872 115 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 PSMB9P28065 219 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 TGFBR1P36897 503 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 TRAM1Q15629 374 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 BSXQ3C1V8 233 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 KPRPQ5T749 579 aaPredicted RBP2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 LRRC6Q86X45 466 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 SPICQ8N5J4 248 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 LINC00337Q8N6G1 96 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 CDRT4Q8N9R6 151 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 OR1P1Q8NH06 330 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 SCGB1C1Q8TD33 95 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF75AQ96N20 296 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 PITX2Q99697 317 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 USH1CQ9Y6N9 552 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 DYSFO75923 2080 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 SVILO95425 2214 aa2.99□□□□□ -1.93
RNU6-40P-201ENST00000384254 KIAA1671Q9BY89 1806 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 GMNCA6NCL1 334 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 FADS2O95864 444 aaKnown RBP2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 CECR9P0C854 216 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 IMPA1P29218 277 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 RAB25P57735 213 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 Q499Y3 187 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZFAND6Q6FIF0 208 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 AHSA2Q719I0 299 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 COPS6Q7L5N1 327 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 C10orf107Q8IVU9 208 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF555Q8NEP9 628 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 ZNF721Q8TF20 911 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 RBPMSQ93062 196 aaKnown RBP2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 CYTH2Q99418 400 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 SLC25A31Q9H0C2 315 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 TREM1Q9NP99 234 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 IFT46Q9NQC8 304 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 ADAMTSL3P82987 1691 aa2.98□□□□□ -1.93
RNU6-40P-201ENST00000384254 HSBP1L1C9JCN9 74 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 KCNK2O95069 426 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 ELK4P28324 431 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 TEAD1P28347 426 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 GTF2H1P32780 548 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 GCLMP48507 274 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 RPS11P62280 158 aaKnown RBP eCLIP2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 PRKCDQ05655 676 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 LINC00303Q3SY05 128 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 GALNT10Q86SR1 603 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 TWIST2Q8WVJ9 160 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 DHX35Q9H5Z1 703 aaKnown RBP2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 FAM60AQ9NP50 221 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 CYB5R1Q9UHQ9 305 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 MRM2Q9UI43 246 aaKnown RBP2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 THADAQ6YHU6 1953 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 MIA3Q5JRA6 1907 aa2.97□□□□□ -1.93
RNU6-40P-201ENST00000384254 ADGRL1O94910 1474 aa2.96□□□□□ -1.93
RNU6-40P-201ENST00000384254 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.96□□□□□ -1.93
RNU6-40P-201ENST00000384254 GPR179Q6PRD1 2367 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 ERICH2A1L162 156 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 F8VP50 259 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 M0QX08 132 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 FABP7O15540 132 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 PFN1P07737 140 aaKnown RBP2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 FLOT2Q14254 428 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 CALHM3Q86XJ0 350 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 ACBD4Q8NC06 268 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 C1orf64Q8NEQ6 169 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 CASTOR1Q8WTX7 329 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 C2orf15Q8WU43 125 aaKnown RBP2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 TNFRSF14Q92956 283 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 FMC1Q96HJ9 113 aa2.96□□□□□ -1.94
RNU6-40P-201ENST00000384254 BIRC8Q96P09 236 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms