RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TCFL5Q9UL49 500 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 TIMM10BQ9Y5J6 103 aa14.12□□□□□ -0.15
NKX3-1-201ENST00000380871 M0R036 132 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 DHHO43323 396 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 TDGF1P13385 188 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 GDF1P27539 372 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 MLF1P58340 268 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 NHLH2Q02577 135 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 AKR7LQ8NHP1 331 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 SCRT1Q9BWW7 348 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 EIF5A2Q9GZV4 153 aaKnown RBP14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 ARG1P05089 322 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 PTAFRP25105 342 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 FAM189A2Q15884 450 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 PPP1R32Q7Z5V6 425 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 SKA3Q8IX90 412 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 RTN4IP1Q8WWV3 396 aaPredicted RBP14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 RSRP1Q9BUV0 290 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 GHRLQ9UBU3 117 aa14.11□□□□□ -0.15
NKX3-1-201ENST00000380871 A0A0U1RQV5 110 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 C7orf77A4D0Y5 90 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 APOC1P02654 83 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 B4GALT1P15291 398 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 SNCAP37840 140 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 MPLP40238 635 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 CARD18P57730 90 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 RAB5BP61020 215 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 PP6455Q8WZ26 134 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF845Q96IR2 970 aaPredicted RBP14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 RNF122Q9H9V4 155 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 STARD10Q9Y365 291 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 FBXO7Q9Y3I1 522 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 CCDC187A0A096LP49 1063 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 GEMIN2O14893 280 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 GAPDHP04406 335 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 SPINK2P20155 84 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 CTSSP25774 331 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 LINC00696Q6ZRV3 163 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 LYPD6BQ8NI32 183 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 HES7Q9BYE0 225 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 CRLF2Q9HC73 371 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 P4HTMQ9NXG6 502 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 PLA2G3Q9NZ20 509 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 PRRC2CQ9Y520 2896 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 YKT6O15498 198 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 NTF4P34130 210 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 LSM6P62312 80 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 TMEM187Q14656 261 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 RSU1Q15404 277 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 GUK1Q16774 197 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 Q6ZPA2 131 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 UBAC2Q8NBM4 344 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 THOC3Q96J01 351 aaKnown RBP14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF407Q9C0G0 2248 aa14.1□□□□□ -0.15
NKX3-1-201ENST00000380871 PRSS44E7EML9 344 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 CBR3O75828 277 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF728P0DKX0 622 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 H3F3AP84243 136 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 ACER2Q5QJU3 275 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 LILRB1Q8NHL6 650 aaPredicted RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 M1APQ8TC57 530 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 GPHA2Q96T91 129 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 BDP1A6H8Y1 2624 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 LINC00587B1AMM8 73 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 CCNOP22674 350 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 SUCLG1P53597 346 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 FAM3AP98173 230 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 ABCA11PQ4W5N1 156 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 C6orf15Q6UXA7 325 aaPredicted RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 NAA60Q9H7X0 242 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 DEPPQ9NTK1 212 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 R4GN57 208 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 CNOT1A5YKK6 2376 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 IGKV1-12A0A0C4DH73 117 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 PINLYPA6NC86 204 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 C1orf196B1AJZ1 125 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 RRP8O43159 456 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 IGKV1D-12P01611 117 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 PRH1P02810 166 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 LCATP04180 440 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 HOXA6P31267 233 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 PPP1CCP36873 323 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 CAMLGP49069 296 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 RGS19P49795 217 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 EIF2S3LQ2VIR3 472 aaKnown RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 NSUN5P2Q63ZY6 315 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 ZNF774Q6NX45 483 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 SLC22A25Q6T423 547 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 C15orf54Q8N8G6 183 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 RGCCQ9H4X1 137 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 SLC2A9Q9NRM0 540 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 FAM212BQ9NTI7 297 aaPredicted RBP14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 KPTNQ9Y664 436 aa14.09□□□□□ -0.15
NKX3-1-201ENST00000380871 MAP1BP46821 2468 aaKnown RBP14.08□□□□□ -0.15
NKX3-1-201ENST00000380871 A0A1W2PPE2 198 aa14.08□□□□□ -0.16
NKX3-1-201ENST00000380871 SLC33A1O00400 549 aaPredicted RBP14.08□□□□□ -0.16
NKX3-1-201ENST00000380871 ONECUT2O95948 504 aa14.08□□□□□ -0.16
NKX3-1-201ENST00000380871 IFNA4P05014 189 aa14.08□□□□□ -0.16
NKX3-1-201ENST00000380871 ZNF806P0C7X5 589 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms