RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 H3BMH7 237 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TACR1P25103 407 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 ICOSLGO75144 302 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 FGF2P09038 288 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TRGC1P0CF51 173 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 OPRM1P35372 400 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 YPEL5P62699 121 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 FAM71E1Q6IPT2 247 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 SSX8Q7RTT4 187 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 FGF22Q9HCT0 170 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 M0R082 166 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 HPRT1P00492 218 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 MT-ND6P03923 174 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 LIM2P55344 173 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 PRSS12P56730 875 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 CISD2Q8N5K1 135 aaKnown RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 MS4A4AQ96JQ5 239 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TRAV1-2A0A0B4J238 106 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 A6NNC1 897 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TRDCB7Z8K6 153 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 UBE2CO00762 179 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 CCL2P13500 99 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 HOXA5P20719 270 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 MMP16P51512 607 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TCTN1Q2MV58 587 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 C1orf140Q5VVS0 124 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 DRAM2Q6UX65 266 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 RTP4Q96DX8 246 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 ARHGEF28Q8N1W1 1705 aaKnown RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 IFT172Q9UG01 1749 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 A0A1B0GWJ7 208 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 DCAF7P61962 342 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 RTN4RL1Q86UN2 441 aaPredicted RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 NPIPB8E9PQR5 432 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 SDCBPO00560 298 aaPredicted RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 NPIPB7O75200 414 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 KISS1RQ969F8 398 aaPredicted RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 MYOZ1Q9NP98 299 aaPredicted RBP9.64□□□□□ -0.87
CLCN4-202ENST00000380833 MED29Q9NX70 200 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TAS2R4Q9NYW5 299 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 TIMM9Q9Y5J7 89 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 V9GYH0 126 aa9.64□□□□□ -0.87
CLCN4-202ENST00000380833 SNRPCP09234 159 aaKnown RBP9.63□□□□□ -0.87
CLCN4-202ENST00000380833 PI3P19957 117 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 C1orf220Q5T0J3 134 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 CNTN4Q8IWV2 1026 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 BOD1L2Q8IYS8 172 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 SSBP4Q9BWG4 385 aaPredicted RBP9.63□□□□□ -0.87
CLCN4-202ENST00000380833 UBE2L5PA0A1B0GUS4 154 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 SPRY1O43609 319 aaPredicted RBP9.63□□□□□ -0.87
CLCN4-202ENST00000380833 ESDP10768 282 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 IER3P46695 156 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 SIGLEC14Q08ET2 396 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 TPBGQ13641 420 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 TMEM249Q2WGJ8 235 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 SLC35D3Q5M8T2 416 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 OR52E5Q8NH55 327 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 GLIPR2Q9H4G4 154 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 LAMTOR2Q9Y2Q5 125 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 MOSPD3O75425 235 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 IGHA1P01876 353 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 DHRS2Q13268 280 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 KHDC3LQ587J8 217 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 SLC35E4Q6ICL7 350 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 PAQR6Q6TCH4 344 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 KCNK15Q9H427 330 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 TCRBV5S2A0A599 114 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 AGFG2O95081 481 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 PNLIPRP2P54317 469 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 RTL8BQ17RB0 113 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 GGTA1PQ4G0N0 100 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 RBM45Q8IUH3 476 aaKnown RBP9.63□□□□□ -0.87
CLCN4-202ENST00000380833 LMO3Q8TAP4 145 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 Q96M85 177 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 CXorf36Q9H7Y0 433 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 C9orf170A2RU37 121 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 ITGB1BP1O14713 200 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 IL4P05112 153 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 C3AR1Q16581 482 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 TMEM255AQ5JRV8 349 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 TMEM186Q96B77 213 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 CHST8Q9H2A9 424 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 FLRT3Q9NZU0 649 aa9.63□□□□□ -0.87
CLCN4-202ENST00000380833 ZNF195O14628 629 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SH2D1BO14796 132 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 ADH4P08319 380 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SLC16A11Q8NCK7 471 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 FGF14Q92915 247 aa9.62□□□□□ -0.87
CLCN4-202ENST00000380833 SEPSECSQ9HD40 501 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms