RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 FAM90A15PP0C7V4 464 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 FAM90A13PP0C7W8 464 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 FAM90A14PP0C7W9 464 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 FAM90A24PP0C7X0 464 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 GABRR1P24046 479 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 PEX2P28328 305 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 MNDAP41218 407 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 HMGA2P52926 109 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 HCCSP53701 268 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 PSME3P61289 254 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 UTF1Q5T230 341 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 OR52W1Q6IF63 320 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 TEX38Q6PEX7 206 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 IQCF1Q8N6M8 205 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 ITFG2Q969R8 447 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 CEP19Q96LK0 163 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 PKIBQ9C010 78 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 EFCAB1Q9HAE3 211 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 IL1RAPQ9NPH3 570 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 MTCH1Q9NZJ7 389 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.24
HMGN1-203ENST00000380748 UBE2J1Q9Y385 318 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-203ENST00000380748 ALMS1Q8TCU4 4167 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 ACOD1A6NK06 481 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 TNFRSF11BO00300 401 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 HAND1O96004 215 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 HCKP08631 526 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 ESRRGP62508 458 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 MFGE8Q08431 387 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-203ENST00000380748 PPP1R8Q12972 351 aaKnown RBP13.57□□□□□ -0.24
HMGN1-203ENST00000380748 RBM39Q14498 530 aaKnown RBP13.57□□□□□ -0.24
HMGN1-203ENST00000380748 CCDC144NLQ6NUI1 221 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 HEPN1Q6WQI6 88 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 OR56B4Q8NH76 319 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 SLAMF9Q96A28 289 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 ISOC1Q96CN7 298 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 U3KQV3 271 aa13.57□□□□□ -0.24
HMGN1-203ENST00000380748 FRAS1Q86XX4 4008 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 PRR32B1ATL7 298 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 DLGAP1O14490 977 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 KRT36O76013 467 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 CCNB2O95067 398 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 IGHG2P01859 326 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 ALOX5APP20292 161 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 CD34P28906 385 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 P2RX3P56373 397 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 HNF4GQ14541 408 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 C16orf89Q6UX73 402 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 FOXRED2Q8IWF2 684 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 DRAM1Q8N682 238 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 CREB3L1Q96BA8 519 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 CADM1Q9BY67 442 aaKnown RBP13.56□□□□□ -0.24
HMGN1-203ENST00000380748 GAL3ST2Q9H3Q3 398 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
HMGN1-203ENST00000380748 FAM230AA0A1W2PPH8 454 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 OOSP1A8MZH6 123 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 TOR1AO14656 332 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 MGST3O14880 152 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 TTRP02766 147 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 TMEM11P17152 192 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 DUSP1P28562 367 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 OR3A1P47881 315 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-203ENST00000380748 FHL3Q13643 280 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 HES1Q14469 280 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-203ENST00000380748 SLX4IPQ5VYV7 408 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 SPAG4Q9NPE6 437 aa13.55□□□□□ -0.24
HMGN1-203ENST00000380748 NUFIP1Q9UHK0 495 aaKnown RBP13.55□□□□□ -0.24
HMGN1-203ENST00000380748 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMGN1-203ENST00000380748 HMGB1P1B2RPK0 211 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-203ENST00000380748 FGF16O43320 207 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 ZNF91Q05481 1191 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 PNLIPRP3Q17RR3 467 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 EMG1Q92979 244 aaKnown RBP13.54□□□□□ -0.24
HMGN1-203ENST00000380748 TOMM40LQ969M1 308 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 RPEQ96AT9 228 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 TM2D3Q9BRN9 247 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 TTTY10Q9BZA0 68 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 SLC7A11Q9UPY5 501 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 SIRT4Q9Y6E7 314 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-203ENST00000380748 V9GYS6 101 aa13.54□□□□□ -0.24
HMGN1-203ENST00000380748 IGKV1-27A0A075B6S5 117 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 TRGV10A0A0A0MS01 117 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 A0A1W2PPI3 338 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 PRR23D1E9PI22 279 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-203ENST00000380748 CCRL2O00421 344 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 JTBO76095 146 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 PRR23D2P0DMB1 279 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-203ENST00000380748 ERP29P30040 261 aaKnown RBP13.53□□□□□ -0.24
HMGN1-203ENST00000380748 INSL3P51460 131 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 PRRX1P54821 245 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 GPR50Q13585 617 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 DEGS2Q6QHC5 323 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 SLC25A26Q70HW3 274 aa13.53□□□□□ -0.24
HMGN1-203ENST00000380748 OR14K1Q8NGZ2 314 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms