RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 INO80EQ8NBZ0 244 aaPredicted RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 WDYHV1Q96HA8 205 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 PAPOLGQ9BWT3 736 aaKnown RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 NECAP2Q9NVZ3 263 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 AK3Q9UIJ7 227 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 TRBV23-1A0A0A0MS06 115 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 C13orf42A0A1B0GVH6 325 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 GEMIN2O14893 280 aaKnown RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 LRP3O75074 770 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 IGKV1D-12P01611 117 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 FTH1P19P0C7X4 201 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 PSMB6P28072 239 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 SERPINF1P36955 418 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 TGIF1Q15583 401 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 NUFIP2Q7Z417 695 aaKnown RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 FBXL14Q8N1E6 418 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 ZNF611Q8N823 705 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 OR56B2PQ8NGI1 322 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 ZNF552Q9H707 407 aaPredicted RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 ZDHHC11Q9H8X9 412 aa10.9□□□□□ -0.66
VPS16-202ENST00000380445 CHMP1AQ9HD42 196 aaPredicted RBP10.9□□□□□ -0.66
VPS16-202ENST00000380445 FAM90A10PA6NDY2 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A18PA6NE21 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A16PA6NEW6 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A20PA6NIJ5 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A8PA6NJQ4 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 SLC22A20A6NK97 555 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A7PA6NKC0 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A22PA8MWA6 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A12PA8MX19 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A5PA8MXJ8 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A23PA8MXZ1 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS16-202ENST00000380445 SPDEFO95238 335 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 CST4P01036 141 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 RLN2P04090 185 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 IFNA4P05014 189 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 CRHP06850 196 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A15PP0C7V4 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A13PP0C7W8 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A14PP0C7W9 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FAM90A24PP0C7X0 464 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 APLNRP35414 380 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 C3AR1Q16581 482 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 SAXO1Q8IYX7 474 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 DEFB124Q8NES8 71 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 OR10AD1Q8NGE0 317 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 OR5M9Q8NGP3 310 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 ZNF2Q9BSG1 426 aaPredicted RBP10.89□□□□□ -0.67
VPS16-202ENST00000380445 LIPGQ9Y5X9 500 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 MED13Q9UHV7 2174 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 PDCD6O75340 191 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 GLRA1P23415 457 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 FOXG1P55316 489 aaPredicted RBP10.89□□□□□ -0.67
VPS16-202ENST00000380445 RBM11P57052 281 aaKnown RBP10.89□□□□□ -0.67
VPS16-202ENST00000380445 SLC9A3R2Q15599 337 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 HFEQ30201 348 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 PAN3Q58A45 887 aaKnown RBP10.89□□□□□ -0.67
VPS16-202ENST00000380445 FBXW9Q5XUX1 488 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 PDZD9Q8IXQ8 264 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 ZDHHC23Q8IYP9 409 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 SFT2D1Q8WV19 159 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 POM121L2Q96KW2 1035 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 DECR2Q9NUI1 292 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 MBD2Q9UBB5 411 aa10.89□□□□□ -0.67
VPS16-202ENST00000380445 A0A1B0GW55 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 S100A9P06702 114 aaKnown RBP10.88□□□□□ -0.67
VPS16-202ENST00000380445 SFTPBP07988 381 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 FCGR3AP08637 254 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4L2P0CJ85 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4L3P0CJ86 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4L4P0CJ87 422 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4L5P0CJ88 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4L6P0CJ89 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4L7P0CJ90 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 OR5H8P0DN80 308 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 PI3P19957 117 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 FUT3P21217 361 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 TNFSF10P50591 281 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 SUPT4H1P63272 117 aaKnown RBP10.88□□□□□ -0.67
VPS16-202ENST00000380445 PRDX4Q13162 271 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 CLN3Q13286 438 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 CEACAM21Q3KPI0 293 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 PIGYQ3MUY2 71 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 SLC25A26Q70HW3 274 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 Q8NFD4 153 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 OR5L1Q8NGL2 311 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 HIST1H2AAQ96QV6 131 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 VRK1Q99986 396 aaPredicted RBP10.88□□□□□ -0.67
VPS16-202ENST00000380445 SULT4A1Q9BR01 284 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 ZNF251Q9BRH9 671 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 HDHD3Q9BSH5 251 aaPredicted RBP10.88□□□□□ -0.67
VPS16-202ENST00000380445 LRFN3Q9BTN0 628 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DUX4Q9UBX2 424 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 ZNF318Q5VUA4 2279 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 DLL1O00548 723 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 BCL2L11O43521 198 aa10.88□□□□□ -0.67
VPS16-202ENST00000380445 ATG12O94817 140 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms