RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 EXT1Q16394 746 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 LCN10Q6JVE6 187 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 Q6ZSR6 202 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 FOXL2NBQ6ZUU3 175 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF283Q8N7M2 679 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 MBD3L1Q8WWY6 194 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 PGAM5Q96HS1 289 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TECTBQ96PL2 329 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 GAL3ST4Q96RP7 486 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 SH3BGRL3Q9H299 93 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TCEAL2Q9H3H9 227 aaPredicted RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 SLC2A9Q9NRM0 540 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 GPR27Q9NS67 375 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 A0A1W2PQF6 199 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TRGC2P03986 189 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 WNT2P09544 360 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM225BP0DP42 221 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 FHITP49789 147 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TAS2R30P59541 319 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 NUTF2P61970 127 aaKnown RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 HIST1H3AP68431 136 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 CNN3Q15417 329 aaKnown RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM211Q6ICI0 200 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 CLEC9AQ6UXN8 241 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 GALNTL5Q7Z4T8 443 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF761Q86XN6 746 aaPredicted RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF100Q8IYN0 542 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 OR10A7Q8NGE5 316 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 TSLPQ969D9 159 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 MEGF10Q96KG7 1140 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 OXGR1Q96P68 337 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 SPSB2Q99619 263 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 RARRES2Q99969 163 aa7.16□□□□□ -1.26
PTPRR-203ENST00000378778 PSMG3Q9BT73 122 aaPredicted RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 ARHGEF17Q96PE2 2063 aaPredicted RBP7.16□□□□□ -1.26
PTPRR-203ENST00000378778 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A10PA6NDY2 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A18PA6NE21 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A16PA6NEW6 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A20PA6NIJ5 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A8PA6NJQ4 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A7PA6NKC0 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF850A8MQ14 1090 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A22PA8MWA6 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A12PA8MX19 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A5PA8MXJ8 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A23PA8MXZ1 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 STMND1H3BQB6 276 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A15PP0C7V4 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A13PP0C7W8 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A14PP0C7W9 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM90A24PP0C7X0 464 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FABP4P15090 132 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CD200P41217 278 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 HERV-K104P61576 105 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 RPL23AP62750 156 aaKnown RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 MRPS21P82921 87 aaKnown RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ABLIM2Q6H8Q1 611 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CRIP3Q6Q6R5 217 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 LYZL2Q7Z4W2 148 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 WDR5BQ86VZ2 330 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 D2HGDHQ8N465 521 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF321PQ8N8H1 164 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CYB561D1Q8N8Q1 229 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 GJC3Q8NFK1 279 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ABHD5Q8WTS1 349 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 BSCL2Q96G97 398 aaPredicted RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FAM71F1Q96KD3 344 aaPredicted RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ATP5SQ99766 215 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 KLHDC3Q9BQ90 382 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 GPR87Q9BY21 358 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 PARP12Q9H0J9 701 aaKnown RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ZNF700Q9H0M5 742 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM222Q9H0R3 208 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 MCTS1Q9ULC4 181 aaKnown RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 HS3ST3B1Q9Y662 390 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 EXPH5Q8NEV8 1989 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 PHF3Q92576 2039 aaKnown RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 A0A087WZY1 265 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CDC14CA4D256 554 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 TCAPO15273 167 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 LY86O95711 162 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 TK1P04183 234 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 RNF224P0DH78 156 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CTSEP14091 401 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 OTX1P32242 354 aaPredicted RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 GUCA1AP43080 201 aaPredicted RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 SLC10A1Q14973 349 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 HAGHQ16775 308 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ACOT6Q3I5F7 207 aaPredicted RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 OTPQ5XKR4 325 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 OGFOD3Q6PK18 319 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CENPVQ7Z7K6 275 aaPredicted RBP7.15□□□□□ -1.26
PTPRR-203ENST00000378778 TMEM252Q8N6L7 170 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 FRZBQ92765 325 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 R3HDM4Q96D70 268 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
PTPRR-203ENST00000378778 CDCA3Q99618 268 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms