RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 HRH4Q9H3N8 390 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF286AQ9HBT8 521 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 SLC2A9Q9NRM0 540 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZFP57Q9NU63 452 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 NSG2Q9Y328 171 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 POMT1Q9Y6A1 747 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 PCSK5Q92824 1860 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 FAM90A10PA6NDY2 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A18PA6NE21 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A16PA6NEW6 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A20PA6NIJ5 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A8PA6NJQ4 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A7PA6NKC0 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A22PA8MWA6 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A12PA8MX19 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A5PA8MXJ8 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A23PA8MXZ1 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 LAMTOR5O43504 91 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 SNAPINO95295 136 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FARS2O95363 451 aaKnown RBP10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A15PP0C7V4 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A13PP0C7W8 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A14PP0C7W9 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM90A24PP0C7X0 464 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 MUC1P15941 1255 aaPredicted RBP10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FUT3P21217 361 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FLI1Q01543 452 aaPredicted RBP10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 MALLQ13021 153 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 SRSF7Q16629 238 aaKnown RBP eCLIP10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 HFEQ30201 348 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 SLC22A25Q6T423 547 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 CALHM1Q8IU99 346 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 GLYATL2Q8WU03 294 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 CT55Q8WUE5 264 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 DYRK2Q92630 601 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 SYT3Q9BQG1 590 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZPBPQ9BS86 351 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 TREM1Q9NP99 234 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 STARD10Q9Y365 291 aa10.15□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM157AC9JC47 383 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 PRSS44E7EML9 344 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 RNASEK-C17orf49H0YIS7 233 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 RPL36A-HNRNPH2H7BZ11 118 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 MED6O75586 246 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 HEXAP06865 529 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 GDF1P27539 372 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 UCP2P55851 309 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 SP6Q3SY56 376 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 TSPO2Q5TGU0 170 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 GPR157Q5UAW9 335 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 PLCXD3Q63HM9 321 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 PIGCQ92535 297 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 WNT2BQ93097 391 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 TOMM40LQ969M1 308 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 REPIN1Q9BWE0 567 aaKnown RBP10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 P4HTMQ9NXG6 502 aa10.14□□□□□ -0.79
TNFRSF9-201ENST00000377507 FBXO24O75426 580 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZNF205O95201 554 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 GLAP06280 429 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 NME2P22392 152 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 IL32P24001 234 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 F2RL1P55085 397 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 SAXO1Q8IYX7 474 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 LGI3Q8N145 548 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 ZNF611Q8N823 705 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 ADAT1Q9BUB4 502 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 BOKQ9UMX3 212 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 LOXL2Q9Y4K0 774 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 PQLC2LA1A4F0 135 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM221AA4D161 298 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 SEC11BP0C7V7 166 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 COX5BP10606 129 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 DUSP1P28562 367 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 P2RY1P47900 373 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 KCNJ3P48549 501 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 FXYD4P59646 89 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 IL13RA2Q14627 380 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMEM88Q6PEY1 159 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 ERGIC1Q969X5 290 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 FAM96BQ9Y3D0 163 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 TMED3Q9Y3Q3 217 aa10.13□□□□□ -0.79
TNFRSF9-201ENST00000377507 GPR137BO60478 399 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 SS18L1O75177 396 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 MRPL33O75394 65 aaKnown RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 NEURL1O76050 574 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 PPYP01298 95 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 AADACP22760 399 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 GLP1RP43220 463 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 NPBWR1P48145 328 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 NPBWR2P48146 333 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 LHX2P50458 406 aa10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 DVL1P1P54792 670 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF9-201ENST00000377507 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms