RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ONECUT2O95948 504 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SELLP14151 372 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SFTPDP35247 375 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 GNMTQ14749 295 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 OR2C3Q8N628 320 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 TMEM171Q8WVE6 324 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 PRO1933Q9H354 126 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 UNKLQ9H9P5 680 aaKnown RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 BCO1Q9HAY6 547 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 GPR173Q9NS66 373 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 ASXL3Q9C0F0 2248 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 RPL36A-HNRNPH2H7BZ11 118 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 MRPS21P82921 87 aaKnown RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 KCNMB1Q16558 191 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SSX9Q7RTT3 188 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 OR6X1Q8NH79 312 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 KIAA1456Q9P272 454 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 PIAS3Q9Y6X2 628 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SCAF4O95104 1147 aaKnown RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 ZNF41P51814 821 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SUMO3P55854 103 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 NKX6-1P78426 367 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 EIF3IQ13347 325 aaKnown RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SLC22A25Q6T423 547 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 DMRTC2Q8IXT2 367 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-201ENST00000376656 OR14L1PQ8NHC6 308 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 PP6455Q8WZ26 134 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 TP53RKQ96S44 253 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 SDHAF3Q9NRP4 125 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 KLRF1Q9NZS2 232 aa14.36□□□□□ -0.11
TRIM39-201ENST00000376656 PLPPR5Q32ZL2 321 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 TVP23CQ96ET8 276 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 C11orf1Q9H5F2 150 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 NKX2-6A6NCS4 301 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 FABP4P15090 132 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 ARL4DP49703 201 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 MTCP1P56278 107 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 OR2T2Q6IF00 324 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 DBX2Q6ZNG2 339 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 WSB1Q9Y6I7 421 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 TRGC1P0CF51 173 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 GLIPR1P48060 266 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 HIST3H3Q16695 136 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 RSPO1Q2MKA7 263 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-201ENST00000376656 DEFB133Q30KQ1 61 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 ABHD5Q8WTS1 349 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 ZDHHC12Q96GR4 267 aa14.35□□□□□ -0.11
TRIM39-201ENST00000376656 FOLR1P15328 257 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 CTSSP25774 331 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 CCR5P51681 352 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 PRSS12P56730 875 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 LSM6P62312 80 aaKnown RBP14.34□□□□□ -0.11
TRIM39-201ENST00000376656 ZNF266Q14584 549 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 NAXEQ8NCW5 288 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 SNIP1Q8TAD8 396 aaKnown RBP14.34□□□□□ -0.11
TRIM39-201ENST00000376656 FRZBQ92765 325 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 SLC7A11Q9UPY5 501 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 SPAG17Q6Q759 2223 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 A0A0U1RQV5 110 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 OR5H1A6NKK0 313 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 REC114Q7Z4M0 266 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 NIPSNAP3BQ9BS92 247 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 CHRNA10Q9GZZ6 450 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 MAGT1Q9H0U3 335 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 UCK1Q9HA47 277 aa14.34□□□□□ -0.11
TRIM39-201ENST00000376656 FOXD3Q9UJU5 478 aaPredicted RBP14.34□□□□□ -0.11
TRIM39-201ENST00000376656 PITX3O75364 302 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 EPHA1P21709 976 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 DDTP30046 118 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 RUNX1Q01196 453 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 COL19A1Q14993 1142 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 SP5Q6BEB4 398 aaPredicted RBP14.33□□□□□ -0.11
TRIM39-201ENST00000376656 P4HA3Q7Z4N8 544 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 MRGPRX4Q96LA9 322 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 GLRX2Q9NS18 164 aa14.33□□□□□ -0.11
TRIM39-201ENST00000376656 FAM230AA0A1W2PPH8 454 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 ETV2O00321 342 aaPredicted RBP14.33□□□□□ -0.12
TRIM39-201ENST00000376656 ST8SIA5O15466 376 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 DRD1P21728 446 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 DTYMKP23919 212 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 Q3ZCU0 254 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 C4orf17Q53FE4 359 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 DEFB119Q8N690 84 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 OR8G5Q8NG78 346 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 OXGR1Q96P68 337 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 IER2Q9BTL4 223 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 ANGPTL4Q9BY76 406 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 METTL9Q9H1A3 318 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 SIRT7Q9NRC8 400 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 UNC13CQ8NB66 2214 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 CD63P08962 238 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 CLDN17P56750 224 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 ZNF506Q5JVG8 444 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 OR5C1Q8NGR4 320 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 SYT3Q9BQG1 590 aa14.33□□□□□ -0.12
TRIM39-201ENST00000376656 CNTRLQ7Z7A1 2325 aa14.32□□□□□ -0.12
TRIM39-201ENST00000376656 IGKV1-27A0A075B6S5 117 aa14.32□□□□□ -0.12
TRIM39-201ENST00000376656 ELOA3CA0A087WX78 387 aaPredicted RBP14.32□□□□□ -0.12
TRIM39-201ENST00000376656 A0A1W2PPC4 97 aa14.32□□□□□ -0.12
TRIM39-201ENST00000376656 BTBD17A6NE02 478 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms