RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 BEND2Q8NDZ0 799 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 DOK1Q99704 481 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 VAX2Q9UIW0 290 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 RNPS1Q15287 305 aaKnown RBP10.43□□□□□ -0.74
VPS13A-205ENST00000376636 ICOSLGO75144 302 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 DHRS3O75911 302 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SRP14P37108 136 aaKnown RBP10.43□□□□□ -0.74
VPS13A-205ENST00000376636 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 ZNF383Q8NA42 475 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 RSRP1Q9BUV0 290 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SAP30LQ9HAJ7 183 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 RER1O15258 196 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 FGF8P55075 233 aaPredicted RBP10.43□□□□□ -0.74
VPS13A-205ENST00000376636 ACSM5Q6NUN0 579 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 LYG1Q8N1E2 194 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 MVB12AQ96EY5 273 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 DOK5Q9P104 306 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 C9orf170A2RU37 121 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 ZNF195O14628 629 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS13A-205ENST00000376636 METRNLQ641Q3 311 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 GSTZ1O43708 216 aaPredicted RBP10.42□□□□□ -0.74
VPS13A-205ENST00000376636 FAHP16930 419 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 CCR2P41597 374 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 GAB4Q2WGN9 574 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 TP53INP2Q8IXH6 220 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 OR1F12Q8NHA8 337 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 OR6C3Q9NZP0 311 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 NPIPB6E9PJ23 425 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 NKAIN4Q8IVV8 208 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SIRT6Q8N6T7 355 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 PDXPQ96GD0 296 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SLC46A2Q9BY10 475 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 VN1R1Q9GZP7 353 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 ERVFRD-1P60508 538 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 OR1N1Q8NGS0 311 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SERTM1A2A2V5 107 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SLC35E3Q7Z769 313 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 PTGESO14684 152 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
VPS13A-205ENST00000376636 ZNF841Q6ZN19 808 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 CA3P07451 260 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 PARD6GQ9BYG4 376 aaPredicted RBP10.42□□□□□ -0.74
VPS13A-205ENST00000376636 CYSLTR2Q9NS75 346 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 A4GNTQ9UNA3 340 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
VPS13A-205ENST00000376636 GABRA1P14867 456 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 HOXA6P31267 233 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 DYNLT3P51808 116 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 LYPD8Q6UX82 237 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 STPG2Q8N412 459 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 hADV38S2A0JD32 116 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 GNG7O60262 68 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 MEGF10Q96KG7 1140 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 DAPP1Q9UN19 280 aa10.42□□□□□ -0.74
VPS13A-205ENST00000376636 IGHV3-64DA0A0J9YX35 117 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 TAPBPO15533 448 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FCGR3BO75015 233 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 HPXP02790 462 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 ASCL1P50553 236 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 CLLU1OSQ5K130 101 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 GBGT1Q8N5D6 347 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 ISG20L2Q9H9L3 353 aaKnown RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FGF20Q9NP95 211 aaPredicted RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FAM219AQ8IW50 185 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 UBE2FQ969M7 185 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 CRYABP02511 175 aaKnown RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 NPPBP16860 134 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 CDX1P47902 265 aaPredicted RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 B3GALT4O96024 378 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 SCD5Q86SK9 330 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 MBNL1Q9NR56 388 aaKnown RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 SPATA45Q537H7 98 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 CA5BP1Q8WTZ4 195 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 LIPGQ9Y5X9 500 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 DOCK7Q96N67 2140 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FRG2CA6NGY1 282 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 IDSB3KWA1 339 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 SPRY1O43609 319 aaPredicted RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 OR5AC1P0C628 307 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 UBE2V2Q15819 145 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 VSIG4Q9Y279 399 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FOXO1Q12778 655 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 SSX8Q7RTT4 187 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 YIPF6Q96EC8 236 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 SLCO1C1Q9NYB5 712 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FBXL17Q9UF56 701 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 PPICP45877 212 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 LIMK1P53667 647 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 RRN3P1Q2M238 152 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 FBXO46Q6PJ61 603 aaPredicted RBP10.41□□□□□ -0.74
VPS13A-205ENST00000376636 LRRTM3Q86VH5 581 aa10.41□□□□□ -0.74
VPS13A-205ENST00000376636 COA4Q9NYJ1 87 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms