RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 STRADBQ9C0K7 418 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 STRAPQ9Y3F4 350 aaKnown RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 TRAV39A0A0B4J263 110 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 SCAF4O95104 1147 aaKnown RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 SERPINA7P05543 415 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 GALNSP34059 522 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 HBG1P69891 147 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 HBG2P69892 147 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 CSRP2Q16527 193 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 LHFPL2Q6ZUX7 228 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 APCDD1LQ8NCL9 501 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 OR1F12Q8NHA8 337 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 NAA60Q9H7X0 242 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 ZNF319Q9P2F9 582 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 GDF9O60383 454 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 MT-ND4LP03901 98 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 GRPP07492 148 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 GPM6AP51674 278 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 MRPL41Q8IXM3 137 aaKnown RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 OR6X1Q8NH79 312 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 IP6K3Q96PC2 410 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 ZNF107Q9UII5 783 aaPredicted RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 KIR2DS1A0A191URI9 304 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 NXPH2O95156 264 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 TIAF1O95411 115 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 FUT3P21217 361 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 KIR2DS4P43632 304 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 KIR2DS1Q14954 304 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 BATFQ16520 125 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 FDX2Q6P4F2 183 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 DHRS11Q6UWP2 260 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 RBMS3Q6XE24 437 aaKnown RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 ZNF808Q8N4W9 903 aaPredicted RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 HPSE2Q8WWQ2 592 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 FOXB1Q99853 325 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 BOKQ9UMX3 212 aaPredicted RBP12.98□□□□□ -0.33
UBQLN1-202ENST00000376395 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 ADAM20O43506 726 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 IFNA10P01566 189 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 PTGER4P35408 488 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 CYB561P49447 251 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 CLDN15P56746 228 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 BAXQ07812 192 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 SPATA46Q5T0L3 261 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 MALSU1Q96EH3 234 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 MTCH2Q9Y6C9 303 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 ZNF727A8MUV8 499 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 NOVA1P51513 510 aaKnown RBP12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 C9orf152Q5JTZ5 239 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 OR2C3Q8N628 320 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 CNEP1R1Q8N9A8 125 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 WSB1Q9Y6I7 421 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 SHANK1Q9Y566 2161 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 NXPH1P58417 271 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 FNDC7Q5VTL7 733 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 SPSB1Q96BD6 273 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
UBQLN1-202ENST00000376395 SIRPB1O00241 398 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 DFFBO76075 338 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 ISG15P05161 165 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 UBE2V2Q15819 145 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 EXT1Q16394 746 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 SSX9Q7RTT3 188 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 GNPNAT1Q96EK6 184 aaPredicted RBP12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 SLC2A9Q9NRM0 540 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 RNF150Q9ULK6 438 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 LIPGQ9Y5X9 500 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 COL4A3Q01955 1670 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 TRBV23-1A0A0A0MS06 115 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 PRR19A6NJB7 356 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 CCL3P10147 92 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 FKBP2P26885 142 aaKnown RBP12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 HFEQ30201 348 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 RNF212Q495C1 297 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 SKA3Q8IX90 412 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 LHX4Q969G2 390 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 PTX4Q96A99 478 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 PHF7Q9BWX1 381 aaPredicted RBP12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 XIRP2A4UGR9 3374 aa12.96□□□□□ -0.33
UBQLN1-202ENST00000376395 ZNF732B4DXR9 585 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 DEGS1O15121 323 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 MDKP21741 143 aaPredicted RBP12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 ARG2P78540 354 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 RUNX1Q01196 453 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 PABPC1L2AQ5JQF8 200 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 ZNF429Q86V71 674 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 KMT5CQ86Y97 462 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 D2HGDHQ8N465 521 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 OR10D4PQ8NGN7 298 aa12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.34
UBQLN1-202ENST00000376395 CABLES2Q9BTV7 478 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms