RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CCDC187A0A096LP49 1063 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 ZNF727A8MUV8 499 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 SERPINE3A8MV23 424 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 C9J4A7 227 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 GAPDHP04406 335 aaKnown RBP13.18□□□□□ -0.3
MSH5-203ENST00000375750 SULT1A1P50225 295 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 MTCP1P56278 107 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 TMEM187Q14656 261 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 PIGYQ3MUY2 71 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 ZNF561Q8N587 486 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 WDSUB1Q8N9V3 476 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 UBAC2Q8NBM4 344 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 OR2M3Q8NG83 312 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 FAM213BQ8TBF2 198 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 SGK3Q96BR1 496 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 DHRS3O75911 302 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 RPS18P62269 152 aaKnown RBP13.18□□□□□ -0.3
MSH5-203ENST00000375750 DCAF12Q5T6F0 453 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 HPSE2Q8WWQ2 592 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 RTN4IP1Q8WWV3 396 aaPredicted RBP13.18□□□□□ -0.3
MSH5-203ENST00000375750 HAS2Q92819 552 aa13.18□□□□□ -0.3
MSH5-203ENST00000375750 IGHV1-45A0A0A0MS14 117 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 NXPH3O95157 252 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 FBP1P09467 338 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 ZNF728P0DKX0 622 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 OMGP23515 440 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 CSNK1A1P48729 337 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
MSH5-203ENST00000375750 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
MSH5-203ENST00000375750 CLINT1Q14677 625 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 HIST3H3Q16695 136 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 MEX3BQ6ZN04 569 aaKnown RBP13.17□□□□□ -0.3
MSH5-203ENST00000375750 Q96M66 194 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 TM2D1Q9BX74 207 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 SEBOXQ9HB31 216 aaPredicted RBP13.17□□□□□ -0.3
MSH5-203ENST00000375750 PISDQ9UG56 409 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 HS3ST3B1Q9Y662 390 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 CDRT15L2A8MXV6 281 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 B4E171 279 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 TSPAN7P41732 249 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 SUMO3P55854 103 aaPredicted RBP13.17□□□□□ -0.3
MSH5-203ENST00000375750 ABCA11PQ4W5N1 156 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 SLAMF9Q96A28 289 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 ZNF251Q9BRH9 671 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 CHST5Q9GZS9 411 aa13.17□□□□□ -0.3
MSH5-203ENST00000375750 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
MSH5-203ENST00000375750 LOC102723996A0A087X1L8 192 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 YIF1AO95070 293 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 SMIM6P0DI80 62 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 COX6A1P12074 109 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
MSH5-203ENST00000375750 CDPF1Q6NVV7 123 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 OR2Y1Q8NGV0 311 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 PLEK2Q9NYT0 353 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 MMP24Q9Y5R2 645 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 V9GYS6 101 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
MSH5-203ENST00000375750 GLP1RP43220 463 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 Q6ZPA2 131 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 TIPARPQ7Z3E1 657 aaKnown RBP13.16□□□□□ -0.3
MSH5-203ENST00000375750 ZNF565Q8N9K5 539 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 NAA60Q9H7X0 242 aa13.16□□□□□ -0.3
MSH5-203ENST00000375750 COL27A1Q8IZC6 1860 aaPredicted RBP13.16□□□□□ -0.3
MSH5-203ENST00000375750 FAM24AA6NFZ4 105 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 E5RGE8 158 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 M0R135 149 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
MSH5-203ENST00000375750 IGLV3-1P01715 115 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 IGHV2-5P01817 119 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 MSR1P21757 451 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 EIF1P41567 113 aaKnown RBP13.15□□□□□ -0.3
MSH5-203ENST00000375750 SLC35A1P78382 337 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 RSU1Q15404 277 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 SLC16A14Q7RTX9 510 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 IMMP1LQ96LU5 166 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 ARV1Q9H2C2 271 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 NSG2Q9Y328 171 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 AQP7P3A6NL99 342 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 SLC22A8Q8TCC7 542 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 NABP1Q96AH0 204 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 LUZP4Q9P127 313 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 POMT1Q9Y6A1 747 aa13.15□□□□□ -0.3
MSH5-203ENST00000375750 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 A0A1W2PNU3 283 aaPredicted RBP13.15□□□□□ -0.31
MSH5-203ENST00000375750 ETV2O00321 342 aaPredicted RBP13.15□□□□□ -0.31
MSH5-203ENST00000375750 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.31
MSH5-203ENST00000375750 IGKV1D-12P01611 117 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 TCN2P20062 427 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 ALDH3B1P43353 468 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 KCNMB1Q16558 191 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 RNF212Q495C1 297 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 SLC25A53Q5H9E4 307 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms