RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 FBXW12Q6X9E4 464 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 OR52M1Q8NGK5 317 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 KCNE4Q8WWG9 221 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SGCZQ96LD1 299 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 FOXB1Q99853 325 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
MSH5-201ENST00000375703 CACFD1Q9UGQ2 172 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ZNF391Q9UJN7 358 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ZNF716A6NP11 495 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 DANCRP0C864 163 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 FOSL1P15407 271 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 SNCAP37840 140 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 RGS19P49795 217 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 PPT1P50897 306 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 CEACAM16Q2WEN9 425 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 MIDNQ504T8 468 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 ZFP82Q8N141 532 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 OR11L1Q8NGX0 322 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
MSH5-201ENST00000375703 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 STARD10Q9Y365 291 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 KPTNQ9Y664 436 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 PHF1O43189 567 aaPredicted RBP12.6□□□□□ -0.39
MSH5-201ENST00000375703 NME2P1O60361 137 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 PDCD6O75340 191 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 CFIP05156 583 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 KCNJ3P48549 501 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 UCP3P55916 312 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 ZNF616Q08AN1 781 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 KRTAP27-1Q3LI81 207 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 PLCXD3Q63HM9 321 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 GGNQ86UU5 652 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 SLC39A7Q92504 469 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 MOB3AQ96BX8 217 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 WNT5BQ9H1J7 359 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 RGCCQ9H4X1 137 aa12.6□□□□□ -0.39
MSH5-201ENST00000375703 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 A0A1W2PRS3 328 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 FOLR3P41439 243 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 GLP1RP43220 463 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 P2RY1P47900 373 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 IL13RA2Q14627 380 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 HMGN3Q15651 99 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.59□□□□□ -0.39
MSH5-201ENST00000375703 ZNF100Q8IYN0 542 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 GINS3Q9BRX5 216 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 ZNF442Q9H7R0 627 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 IL36GQ9NZH8 169 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 LUZP4Q9P127 313 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 hCG_38984A0A1B0GV85 526 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 LINC01387J3KSC0 135 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 CAMLGP49069 296 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 PCBD1P61457 104 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 HERV-K104P61576 105 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 NHLH2Q02577 135 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 TMEM211Q6ICI0 200 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 COMMD1Q8N668 190 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 RPS10P5Q9NQ39 176 aa12.59□□□□□ -0.39
MSH5-201ENST00000375703 TRAPPC6AO75865 159 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 FUT3P21217 361 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 AADACP22760 399 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 GUK1Q16774 197 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 PMS2CLQ68D20 193 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 C12orf57Q99622 126 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
MSH5-201ENST00000375703 PI4KAP42356 2102 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 PRH1P02810 166 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 GLAP06280 429 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 AKR1C3P42330 323 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 FHITP49789 147 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
MSH5-201ENST00000375703 BATF2Q8N1L9 274 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 HLA-CQ95604 372 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 C14orf79Q96F83 325 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 CLCC1Q96S66 551 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
MSH5-201ENST00000375703 RSRP1Q9BUV0 290 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 GPR35Q9HC97 309 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 ZDHHC8Q9ULC8 765 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
MSH5-201ENST00000375703 TMED3Q9Y3Q3 217 aa12.58□□□□□ -0.4
MSH5-201ENST00000375703 PQLC2LA1A4F0 135 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
MSH5-201ENST00000375703 GNMTQ14749 295 aa12.57□□□□□ -0.4
MSH5-201ENST00000375703 WIPI1Q5MNZ9 446 aaPredicted RBP12.57□□□□□ -0.4
MSH5-201ENST00000375703 MEX3BQ6ZN04 569 aaKnown RBP12.57□□□□□ -0.4
MSH5-201ENST00000375703 CALHM1Q8IU99 346 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms